The 2.0 version of rSNPBase

Variant report

Variant rs13109351
Chromosome Location chr4:57924618-57924619
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:52 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:57899400-57925000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
2 chr4:57899600-57942200 Weak transcription Primary hematopoietic stem cells blood
3 chr4:57915800-57930200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
4 chr4:57917600-57931000 Weak transcription Pancreas Pancrea
5 chr4:57917800-57926000 Weak transcription Fetal Kidney kidney
6 chr4:57918000-57929000 Weak transcription HUVEC blood vessel
7 chr4:57918600-57929200 Weak transcription Fetal Muscle Leg muscle
8 chr4:57918600-57936800 Weak transcription Monocytes-CD14+_RO01746 blood
9 chr4:57920400-57925600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
10 chr4:57920400-57926200 Weak transcription A549 lung
11 chr4:57920400-57930200 Weak transcription Lung lung
12 chr4:57920600-57927600 Weak transcription HMEC breast
13 chr4:57921000-57926800 Weak transcription Small Intestine intestine
14 chr4:57921000-57931000 Weak transcription NHEK skin
15 chr4:57921200-57924800 Enhancers Right Ventricle heart
16 chr4:57921800-57928200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
17 chr4:57922000-57926200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
18 chr4:57922800-57931200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
19 chr4:57923000-57926200 Weak transcription NHLF lung
20 chr4:57923000-57928600 Weak transcription Psoas Muscle Psoas
21 chr4:57923000-57929200 Weak transcription Brain Hippocampus Middle brain
22 chr4:57923000-57930200 Weak transcription ES-I3 Cell Line embryonic stem cell
23 chr4:57923000-57931000 Weak transcription Primary hematopoietic stem cells short term culture blood
24 chr4:57923000-57931800 Weak transcription Duodenum Mucosa Duodenum
25 chr4:57923000-57932000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
26 chr4:57923200-57926400 Weak transcription NH-A brain
27 chr4:57923400-57926600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
28 chr4:57923400-57926800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
29 chr4:57923600-57928800 Weak transcription Fetal Lung lung
30 chr4:57923800-57926800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
31 chr4:57923800-57937200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
32 chr4:57924000-57926200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
33 chr4:57924000-57929400 Weak transcription Brain Anterior Caudate brain
34 chr4:57924000-57929800 Weak transcription Fetal Stomach stomach
35 chr4:57924000-57931200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
36 chr4:57924200-57925800 Weak transcription Osteobl bone
37 chr4:57924200-57926000 Weak transcription Rectal Smooth Muscle rectum
38 chr4:57924200-57926200 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
39 chr4:57924200-57926200 Weak transcription Aorta Aorta
40 chr4:57924200-57926200 Weak transcription Colon Smooth Muscle Colon
41 chr4:57924200-57926600 Weak transcription Stomach Smooth Muscle stomach
42 chr4:57924200-57926800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
43 chr4:57924200-57926800 Weak transcription Ovary ovary
44 chr4:57924200-57927000 Weak transcription Left Ventricle heart
45 chr4:57924200-57927200 Weak transcription HSMM muscle
46 chr4:57924200-57927600 Weak transcription Right Atrium heart
47 chr4:57924200-57927800 Weak transcription Fetal Heart heart
48 chr4:57924200-57929200 Weak transcription Duodenum Smooth Muscle Duodenum
49 chr4:57924200-57931200 Weak transcription Spleen Spleen
50 chr4:57924400-57925200 Weak transcription Muscle Satellite Cultured Cells --

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Last update: Aug 31, 2015