The 2.0 version of rSNPBase

Variant report

Variant rs13147998
Chromosome Location chr4:7866659-7866660
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:105 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:7848000-7872200 Weak transcription ES-WA7 Cell Line embryonic stem cell
2 chr4:7852600-7873600 Weak transcription Pancreatic Islets Pancreatic Islet
3 chr4:7856200-7872800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
4 chr4:7857600-7873000 Weak transcription Colonic Mucosa Colon
5 chr4:7857800-7896400 Weak transcription Spleen Spleen
6 chr4:7859600-7869000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
7 chr4:7859600-7869400 Weak transcription Rectal Mucosa Donor 29 rectum
8 chr4:7859800-7872600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
9 chr4:7860200-7867600 Genic enhancers IMR90 fetal lung fibroblasts Cell Line lung
10 chr4:7860400-7870200 Weak transcription Primary T helper cells fromperipheralblood blood
11 chr4:7860800-7869000 Weak transcription Aorta Aorta
12 chr4:7860800-7872800 Weak transcription Right Ventricle heart
13 chr4:7861200-7872800 Weak transcription Psoas Muscle Psoas
14 chr4:7862600-7870000 Weak transcription Sigmoid Colon Sigmoid Colon
15 chr4:7862800-7868600 Weak transcription Left Ventricle heart
16 chr4:7863200-7867400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
17 chr4:7863400-7867200 Weak transcription Rectal Mucosa Donor 31 rectum
18 chr4:7863600-7868400 Weak transcription Placenta Placenta
19 chr4:7863600-7869000 Weak transcription Adipose Nuclei Adipose
20 chr4:7863600-7871000 Weak transcription Rectal Smooth Muscle rectum
21 chr4:7863800-7869000 Weak transcription Colon Smooth Muscle Colon
22 chr4:7863800-7869000 Weak transcription Fetal Brain Female brain
23 chr4:7863800-7869000 Weak transcription Placenta Amnion Placenta Amnion
24 chr4:7863800-7872800 Weak transcription Brain Hippocampus Middle brain
25 chr4:7864800-7867200 Weak transcription Breast Myoepithelial Primary Cells Breast
26 chr4:7864800-7873000 Weak transcription Primary T cells from cord blood blood
27 chr4:7865200-7872200 Weak transcription Right Atrium heart
28 chr4:7865400-7867200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
29 chr4:7865400-7868400 Weak transcription Brain Germinal Matrix brain
30 chr4:7865400-7869000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
31 chr4:7865400-7872600 Weak transcription Fetal Heart heart
32 chr4:7865400-7875800 Weak transcription iPS-15b Cell Line embryonic stem cell
33 chr4:7865600-7867400 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
34 chr4:7865800-7869200 Weak transcription Brain Anterior Caudate brain
35 chr4:7865800-7870000 Weak transcription ES-I3 Cell Line embryonic stem cell
36 chr4:7865800-7871400 Weak transcription Skeletal Muscle Male skeletal muscle
37 chr4:7865800-7872000 Weak transcription Skeletal Muscle Female skeletal muscle
38 chr4:7865800-7872800 Strong transcription Fetal Stomach stomach
39 chr4:7866000-7866800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
40 chr4:7866000-7866800 Weak transcription Cortex derived primary cultured neurospheres brain
41 chr4:7866000-7866800 Weak transcription Fetal Muscle Leg muscle
42 chr4:7866000-7866800 Weak transcription A549 lung
43 chr4:7866000-7866800 Strong transcription Osteobl bone
44 chr4:7866000-7867000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
45 chr4:7866000-7867000 Weak transcription HUES64 Cell Line embryonic stem cell
46 chr4:7866000-7867000 Weak transcription Stomach Smooth Muscle stomach
47 chr4:7866000-7867000 Weak transcription HUVEC blood vessel
48 chr4:7866000-7867200 Weak transcription Fetal Adrenal Gland Adrenal Gland
49 chr4:7866000-7867200 Weak transcription Fetal Lung lung
50 chr4:7866000-7867400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived

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Last update: Aug 31, 2015