The 2.0 version of rSNPBase

Variant report

Variant rs62289351
Chromosome Location chr4:7882362-7882363
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:80 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:7857800-7896400 Weak transcription Spleen Spleen
2 chr4:7866000-7882400 Weak transcription iPS-18 Cell Line embryonic stem cell
3 chr4:7866000-7885600 Weak transcription Esophagus oesophagus
4 chr4:7870400-7882400 Weak transcription HUES48 Cell Line embryonic stem cell
5 chr4:7873400-7883000 Weak transcription Right Ventricle heart
6 chr4:7873600-7894000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
7 chr4:7874600-7887600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
8 chr4:7874600-7892800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
9 chr4:7874600-7894000 Weak transcription Placenta Amnion Placenta Amnion
10 chr4:7876000-7891800 Weak transcription Hela-S3 cervix
11 chr4:7876800-7885400 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
12 chr4:7877000-7883200 Enhancers Colon Smooth Muscle Colon
13 chr4:7877400-7883200 Enhancers Fetal Heart heart
14 chr4:7877400-7885000 Enhancers NH-A brain
15 chr4:7877800-7883200 Enhancers Cortex derived primary cultured neurospheres brain
16 chr4:7877800-7883200 Enhancers Fetal Stomach stomach
17 chr4:7877800-7883200 Enhancers Ovary ovary
18 chr4:7877800-7883200 Enhancers HSMM muscle
19 chr4:7877800-7883400 Enhancers Fetal Muscle Leg muscle
20 chr4:7878000-7882400 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
21 chr4:7878000-7883000 Enhancers HSMMtube muscle
22 chr4:7878000-7883200 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
23 chr4:7878200-7882800 Weak transcription Placenta Placenta
24 chr4:7878200-7898400 Weak transcription Sigmoid Colon Sigmoid Colon
25 chr4:7878400-7886600 Weak transcription Small Intestine intestine
26 chr4:7878600-7883200 Enhancers HUVEC blood vessel
27 chr4:7879000-7888200 Weak transcription Fetal Intestine Large intestine
28 chr4:7879200-7882400 Weak transcription HUES6 Cell Line embryonic stem cell
29 chr4:7879400-7882400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
30 chr4:7879400-7883200 Enhancers Rectal Smooth Muscle rectum
31 chr4:7879400-7883600 Weak transcription HMEC breast
32 chr4:7879400-7888000 Weak transcription Fetal Brain Female brain
33 chr4:7879400-7891800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
34 chr4:7879600-7882400 Weak transcription Primary T killer memory cells from peripheral blood blood
35 chr4:7879800-7882400 Weak transcription Primary T helper naive cells fromperipheralblood blood
36 chr4:7879800-7883200 Enhancers Left Ventricle heart
37 chr4:7879800-7886800 Weak transcription iPS-20b Cell Line embryonic stem cell
38 chr4:7880000-7882800 Enhancers Muscle Satellite Cultured Cells --
39 chr4:7880200-7882400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
40 chr4:7880200-7882600 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
41 chr4:7880200-7883000 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
42 chr4:7880200-7884800 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
43 chr4:7880400-7888000 Weak transcription Brain Anterior Caudate brain
44 chr4:7880600-7882800 Enhancers NHDF-Ad bronchial
45 chr4:7880600-7883200 Enhancers NHLF lung
46 chr4:7880600-7883600 Enhancers Fetal Muscle Trunk muscle
47 chr4:7880800-7882600 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
48 chr4:7880800-7882600 Enhancers Fetal Brain Male brain
49 chr4:7880800-7883200 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
50 chr4:7880800-7883200 Enhancers Pancreas Pancrea

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Last update: Aug 31, 2015