The 2.0 version of rSNPBase

Variant report

Variant rs13154267
Chromosome Location chr5:79420583-79420584
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:42 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:79406200-79421000 Weak transcription Right Ventricle heart
2 chr5:79407400-79424000 Weak transcription Fetal Adrenal Gland Adrenal Gland
3 chr5:79409800-79420800 Weak transcription Thymus Thymus
4 chr5:79410000-79430800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
5 chr5:79412600-79424200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
6 chr5:79413600-79420600 Weak transcription Primary T regulatory cells fromperipheralblood blood
7 chr5:79415600-79420600 Weak transcription Brain Anterior Caudate brain
8 chr5:79417000-79437000 Weak transcription Pancreas Pancrea
9 chr5:79417400-79425400 Enhancers Primary monocytes fromperipheralblood blood
10 chr5:79417400-79430400 Weak transcription Dnd41 blood
11 chr5:79417600-79420600 Weak transcription Fetal Intestine Small intestine
12 chr5:79417600-79421800 Flanking Active TSS Monocytes-CD14+_RO01746 blood
13 chr5:79418000-79421000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
14 chr5:79418200-79421200 Enhancers Primary T helper cells PMA-I stimulated --
15 chr5:79418200-79422200 Enhancers Primary T killer naive cells fromperipheralblood blood
16 chr5:79418200-79424000 Weak transcription Fetal Stomach stomach
17 chr5:79418400-79421600 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
18 chr5:79418600-79423200 Enhancers Primary T helper cells fromperipheralblood blood
19 chr5:79419000-79421800 Weak transcription Primary neutrophils fromperipheralblood blood
20 chr5:79419200-79421000 Weak transcription Primary hematopoietic stem cells short term culture blood
21 chr5:79419200-79422000 Weak transcription Small Intestine intestine
22 chr5:79419200-79422400 Enhancers Primary T helper naive cells fromperipheralblood blood
23 chr5:79419400-79421000 Enhancers Primary T killer memory cells from peripheral blood blood
24 chr5:79419400-79421000 Weak transcription Rectal Mucosa Donor 29 rectum
25 chr5:79419400-79423600 Enhancers Primary T helper memory cells from peripheral blood 2 blood
26 chr5:79419600-79420600 Weak transcription Primary T helper naive cells from peripheral blood blood
27 chr5:79419600-79422400 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
28 chr5:79419600-79423000 Genic enhancers Primary T cells from cord blood blood
29 chr5:79419600-79423000 Enhancers Primary T helper memory cells from peripheral blood 1 blood
30 chr5:79419600-79435200 Weak transcription Liver Liver
31 chr5:79419800-79420600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
32 chr5:79419800-79420600 Weak transcription Placenta Placenta
33 chr5:79420000-79420600 Genic enhancers Primary T cells fromperipheralblood blood
34 chr5:79420000-79420800 Enhancers Fetal Muscle Leg muscle
35 chr5:79420000-79421000 Enhancers Adipose Nuclei Adipose
36 chr5:79420000-79421600 Flanking Active TSS Foreskin Melanocyte Primary Cells skin03 Skin
37 chr5:79420400-79421000 Weak transcription Colon Smooth Muscle Colon
38 chr5:79420400-79421600 Enhancers Primary Natural Killer cells fromperipheralblood blood
39 chr5:79420400-79421800 Enhancers Primary B cells from cord blood blood
40 chr5:79420400-79421800 Enhancers Fetal Thymus thymus
41 chr5:79420400-79422200 Flanking Active TSS GM12878-XiMat blood
42 chr5:79420400-79423200 Enhancers Primary T helper 17 cells PMA-I stimulated --

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015