Variant report

Variant rs36056668
Chromosome Location chr5:79420866-79420867
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:52 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:79406200-79421000 Weak transcription Right Ventricle heart
2 chr5:79407400-79424000 Weak transcription Fetal Adrenal Gland Adrenal Gland
3 chr5:79410000-79430800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
4 chr5:79412600-79424200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
5 chr5:79417000-79437000 Weak transcription Pancreas Pancrea
6 chr5:79417400-79425400 Enhancers Primary monocytes fromperipheralblood blood
7 chr5:79417400-79430400 Weak transcription Dnd41 blood
8 chr5:79417600-79421800 Flanking Active TSS Monocytes-CD14+_RO01746 blood
9 chr5:79418000-79421000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
10 chr5:79418200-79421200 Enhancers Primary T helper cells PMA-I stimulated --
11 chr5:79418200-79422200 Enhancers Primary T killer naive cells fromperipheralblood blood
12 chr5:79418200-79424000 Weak transcription Fetal Stomach stomach
13 chr5:79418400-79421600 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
14 chr5:79418600-79423200 Enhancers Primary T helper cells fromperipheralblood blood
15 chr5:79419000-79421800 Weak transcription Primary neutrophils fromperipheralblood blood
16 chr5:79419200-79421000 Weak transcription Primary hematopoietic stem cells short term culture blood
17 chr5:79419200-79422000 Weak transcription Small Intestine intestine
18 chr5:79419200-79422400 Enhancers Primary T helper naive cells fromperipheralblood blood
19 chr5:79419400-79421000 Enhancers Primary T killer memory cells from peripheral blood blood
20 chr5:79419400-79421000 Weak transcription Rectal Mucosa Donor 29 rectum
21 chr5:79419400-79423600 Enhancers Primary T helper memory cells from peripheral blood 2 blood
22 chr5:79419600-79422400 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
23 chr5:79419600-79423000 Genic enhancers Primary T cells from cord blood blood
24 chr5:79419600-79423000 Enhancers Primary T helper memory cells from peripheral blood 1 blood
25 chr5:79419600-79435200 Weak transcription Liver Liver
26 chr5:79420000-79421000 Enhancers Adipose Nuclei Adipose
27 chr5:79420000-79421600 Flanking Active TSS Foreskin Melanocyte Primary Cells skin03 Skin
28 chr5:79420400-79421000 Weak transcription Colon Smooth Muscle Colon
29 chr5:79420400-79421600 Enhancers Primary Natural Killer cells fromperipheralblood blood
30 chr5:79420400-79421800 Enhancers Primary B cells from cord blood blood
31 chr5:79420400-79421800 Enhancers Fetal Thymus thymus
32 chr5:79420400-79422200 Flanking Active TSS GM12878-XiMat blood
33 chr5:79420400-79423200 Enhancers Primary T helper 17 cells PMA-I stimulated --
34 chr5:79420600-79421000 ZNF genes & repeats H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
35 chr5:79420600-79421200 Enhancers Brain Anterior Caudate brain
36 chr5:79420600-79421200 Enhancers Placenta Placenta
37 chr5:79420600-79421600 Enhancers Primary mononuclear cells fromperipheralblood Blood
38 chr5:79420600-79421600 Strong transcription Fetal Intestine Small intestine
39 chr5:79420600-79421600 Enhancers Sigmoid Colon Sigmoid Colon
40 chr5:79420600-79421800 Enhancers Primary T cells fromperipheralblood blood
41 chr5:79420600-79422200 Enhancers Primary B cells from peripheral blood blood
42 chr5:79420600-79422200 Enhancers Primary T regulatory cells fromperipheralblood blood
43 chr5:79420600-79422600 Enhancers Primary T helper naive cells from peripheral blood blood
44 chr5:79420600-79424000 Weak transcription Fetal Muscle Trunk muscle
45 chr5:79420800-79421000 Active TSS Fetal Brain Male brain
46 chr5:79420800-79421000 Enhancers Spleen Spleen
47 chr5:79420800-79421200 Enhancers Esophagus oesophagus
48 chr5:79420800-79421600 Enhancers Duodenum Mucosa Duodenum
49 chr5:79420800-79421600 Enhancers Thymus Thymus
50 chr5:79420800-79421800 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived

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