The 2.0 version of rSNPBase

Variant report

Variant rs13168347
Chromosome Location chr5:59090688-59090689
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:46 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:59086000-59094800 Weak transcription Primary hematopoietic stem cells blood
2 chr5:59086400-59090800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
3 chr5:59086600-59094600 Weak transcription Right Atrium heart
4 chr5:59086600-59095400 Weak transcription iPS-20b Cell Line embryonic stem cell
5 chr5:59086800-59095200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
6 chr5:59086800-59095400 Weak transcription HUES48 Cell Line embryonic stem cell
7 chr5:59087200-59092000 Weak transcription iPS-18 Cell Line embryonic stem cell
8 chr5:59087400-59094200 Weak transcription HUVEC blood vessel
9 chr5:59087400-59095800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
10 chr5:59087400-59106000 Weak transcription Aorta Aorta
11 chr5:59087800-59094400 Weak transcription Fetal Lung lung
12 chr5:59089000-59091800 Weak transcription Colon Smooth Muscle Colon
13 chr5:59089000-59094400 Enhancers Hela-S3 cervix
14 chr5:59089200-59091600 Weak transcription Adipose Nuclei Adipose
15 chr5:59089200-59091800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
16 chr5:59089200-59091800 Weak transcription Rectal Smooth Muscle rectum
17 chr5:59089400-59091400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
18 chr5:59089400-59094600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
19 chr5:59089600-59092400 Enhancers Fetal Brain Male brain
20 chr5:59089800-59094400 Weak transcription Pancreatic Islets Pancreatic Islet
21 chr5:59089800-59095600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
22 chr5:59090000-59092400 Enhancers Primary hematopoietic stem cells short term culture blood
23 chr5:59090000-59093600 Enhancers A549 lung
24 chr5:59090000-59094600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
25 chr5:59090000-59094800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
26 chr5:59090000-59094800 Weak transcription HSMM muscle
27 chr5:59090000-59094800 Weak transcription NH-A brain
28 chr5:59090000-59094800 Weak transcription NHDF-Ad bronchial
29 chr5:59090000-59095400 Weak transcription Brain Inferior Temporal Lobe brain
30 chr5:59090000-59095800 Weak transcription Brain Substantia Nigra brain
31 chr5:59090200-59091800 Weak transcription HUES6 Cell Line embryonic stem cell
32 chr5:59090200-59094600 Weak transcription Muscle Satellite Cultured Cells --
33 chr5:59090200-59094800 Weak transcription Placenta Amnion Placenta Amnion
34 chr5:59090200-59095200 Weak transcription Brain Cingulate Gyrus brain
35 chr5:59090400-59091400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
36 chr5:59090400-59094200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
37 chr5:59090400-59094400 Weak transcription HMEC breast
38 chr5:59090400-59094400 Weak transcription NHEK skin
39 chr5:59090400-59094600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
40 chr5:59090400-59094600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
41 chr5:59090400-59095000 Weak transcription Fetal Brain Female brain
42 chr5:59090600-59090800 Enhancers Brain Angular Gyrus brain
43 chr5:59090600-59091800 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
44 chr5:59090600-59092000 Enhancers Primary B cells from peripheral blood blood
45 chr5:59090600-59094600 Weak transcription Brain Hippocampus Middle brain
46 chr5:59090600-59095600 Weak transcription Brain Anterior Caudate brain

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Last update: Aug 31, 2015