Variant report

Variant	rs13170811
Chromosome Location	chr5:36795730-36795731
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr5:36795024..36797633-chr5:36804153..36806253,2	K562	blood:
2	chr5:36784826..36787307-chr5:36794561..36797174,2	K562	blood:

Extended variants
information (count: 33 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:31)

rs_ID	r²[population]
rs12657771	0.93[AFR][1000 genomes];0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs13158310	0.97[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs13180309	0.97[AFR][1000 genomes];0.94[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1466862	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs150380	0.87[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs151944	0.83[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs158622	0.85[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs158623	0.86[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs158624	0.93[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs158791	0.82[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs158796	0.86[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs158803	0.83[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs159749	0.81[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs159751	0.80[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs159753	0.81[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs159755	0.82[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs168662	0.83[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs184182	0.86[ASN][1000 genomes]
rs292182	0.82[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs292183	0.90[ASN][1000 genomes]
rs292184	0.84[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs292194	0.82[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs292195	0.82[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs296962	0.84[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs300060	0.85[ASN][1000 genomes]
rs300061	0.81[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs300063	0.81[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs300064	0.80[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs300065	0.81[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs3104057	0.84[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs6899155	0.88[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv492319	chr5:36570707-37061019	Weak transcription Active TSS Flanking Active TSS Strong transcription Enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Genic enhancers Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	53 gene(s)	inside rSNPs	diseases
2	nsv527961	chr5:36781051-36828730	Enhancers Weak transcription Flanking Bivalent TSS/Enh	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:36791400-36795800	Weak transcription	Fetal Muscle Leg	muscle
2	chr5:36793800-36796400	Weak transcription	Psoas Muscle	Psoas
3	chr5:36795000-36797400	Enhancers	HSMMtube	muscle

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