The 2.0 version of rSNPBase

Variant report

Variant rs1317324
Chromosome Location chr1:157977359-157977360
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:89 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:157965200-157979400 Weak transcription Thymus Thymus
2 chr1:157965800-157983200 Weak transcription Dnd41 blood
3 chr1:157966400-157979800 Enhancers Ovary ovary
4 chr1:157966600-157979600 Enhancers Adipose Nuclei Adipose
5 chr1:157968800-157982200 Enhancers Placenta Placenta
6 chr1:157969000-157988000 Weak transcription Psoas Muscle Psoas
7 chr1:157969200-157978400 Weak transcription Hela-S3 cervix
8 chr1:157969800-157979200 Enhancers Colon Smooth Muscle Colon
9 chr1:157969800-157982200 Enhancers Fetal Heart heart
10 chr1:157970800-157980200 Enhancers Fetal Lung lung
11 chr1:157971800-157978800 Enhancers HSMMtube muscle
12 chr1:157972200-157978400 Weak transcription Small Intestine intestine
13 chr1:157973000-157977400 Genic enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
14 chr1:157973200-157977600 Genic enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
15 chr1:157973200-157979000 Genic enhancers IMR90 fetal lung fibroblasts Cell Line lung
16 chr1:157973400-157978600 Enhancers NHDF-Ad bronchial
17 chr1:157973600-157977400 Weak transcription Esophagus oesophagus
18 chr1:157973600-157977600 Genic enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
19 chr1:157973600-157979200 Weak transcription Rectal Mucosa Donor 29 rectum
20 chr1:157973600-157980000 Enhancers Breast Myoepithelial Primary Cells Breast
21 chr1:157973800-157977400 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
22 chr1:157973800-157979000 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
23 chr1:157974000-157977400 Weak transcription Fetal Intestine Large intestine
24 chr1:157974400-157979000 Genic enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
25 chr1:157974600-157977400 Enhancers Stomach Smooth Muscle stomach
26 chr1:157975000-157981800 Enhancers Cortex derived primary cultured neurospheres brain
27 chr1:157975200-157978600 Genic enhancers Fetal Stomach stomach
28 chr1:157975200-157980600 Enhancers Left Ventricle heart
29 chr1:157975200-157980600 Enhancers Lung lung
30 chr1:157975400-157977400 Genic enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
31 chr1:157975400-157977400 Enhancers Skeletal Muscle Female skeletal muscle
32 chr1:157975400-157981600 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
33 chr1:157975400-157982000 Enhancers ES-I3 Cell Line embryonic stem cell
34 chr1:157975400-157996800 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
35 chr1:157975600-157978000 Weak transcription Fetal Thymus thymus
36 chr1:157975600-157979800 Enhancers Duodenum Smooth Muscle Duodenum
37 chr1:157975800-157980600 Enhancers Fetal Brain Male brain
38 chr1:157976000-157979800 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
39 chr1:157976000-157981600 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
40 chr1:157976000-157981800 Enhancers Right Atrium heart
41 chr1:157976200-157977400 Weak transcription Duodenum Mucosa Duodenum
42 chr1:157976200-157977600 Enhancers Fetal Kidney kidney
43 chr1:157976200-157978000 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
44 chr1:157976200-157979400 Enhancers NH-A brain
45 chr1:157976200-157981800 Enhancers Fetal Muscle Trunk muscle
46 chr1:157976200-157982000 Enhancers iPS-15b Cell Line embryonic stem cell
47 chr1:157976200-157982000 Enhancers Placenta Amnion Placenta Amnion
48 chr1:157976200-157982600 Enhancers HUES64 Cell Line embryonic stem cell
49 chr1:157976200-157982800 Enhancers ES-UCSF4 Cell Line embryonic stem cell
50 chr1:157976400-157977800 Enhancers iPS DF 6.9 Cell Line embryonic stem cell

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Last update: Aug 31, 2015