Variant report

Variant	rs13174140
Chromosome Location	chr5:43863579-43863580
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 8 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:7)

rs_ID	r²[population]
rs10045432	0.96[AFR][1000 genomes];0.99[ASN][1000 genomes]
rs13184125	1.00[CEU][hapmap]
rs6862256	0.99[ASN][1000 genomes]
rs6863586	0.95[AFR][1000 genomes];0.99[ASN][1000 genomes]
rs6871373	0.82[YRI][hapmap]
rs71631107	0.99[ASN][1000 genomes]
rs7723677	0.83[YRI][hapmap]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2830374	chr5:43785548-44341631	Enhancers Weak transcription Active TSS ZNF genes & repeats Bivalent Enhancer Flanking Active TSS Strong transcription Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:43860000-43870600	Weak transcription	Fetal Heart	heart
2	chr5:43863000-43864600	Enhancers	Fetal Lung	lung
3	chr5:43863400-43864400	Enhancers	Fetal Stomach	stomach

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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