Variant report

Variant rs13180906
Chromosome Location chr5:124245633-124245634
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:55 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:124237600-124246800 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
2 chr5:124238400-124246200 Weak transcription Aorta Aorta
3 chr5:124240600-124245800 Enhancers Cortex derived primary cultured neurospheres brain
4 chr5:124241600-124246000 Enhancers Fetal Adrenal Gland Adrenal Gland
5 chr5:124241800-124246800 Enhancers Liver Liver
6 chr5:124241800-124246800 Enhancers Fetal Lung lung
7 chr5:124242000-124246000 Enhancers Fetal Intestine Small intestine
8 chr5:124242000-124246200 Enhancers Fetal Intestine Large intestine
9 chr5:124242000-124246600 Enhancers Ovary ovary
10 chr5:124242600-124248000 Weak transcription Primary B cells from peripheral blood blood
11 chr5:124242800-124247400 Enhancers Brain Anterior Caudate brain
12 chr5:124242800-124248600 Enhancers Brain Substantia Nigra brain
13 chr5:124243000-124248600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
14 chr5:124243000-124248600 Weak transcription Primary B cells from cord blood blood
15 chr5:124243200-124246200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
16 chr5:124243200-124246400 Weak transcription Psoas Muscle Psoas
17 chr5:124243200-124246600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
18 chr5:124244000-124245800 Enhancers HUVEC blood vessel
19 chr5:124244000-124247000 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
20 chr5:124244000-124247400 Enhancers Brain Hippocampus Middle brain
21 chr5:124244200-124245800 Enhancers Dnd41 blood
22 chr5:124244400-124245800 Enhancers ES-I3 Cell Line embryonic stem cell
23 chr5:124244400-124245800 Enhancers HUES6 Cell Line embryonic stem cell
24 chr5:124244400-124245800 Enhancers Fetal Stomach stomach
25 chr5:124244400-124245800 Enhancers Skeletal Muscle Male skeletal muscle
26 chr5:124244400-124246000 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
27 chr5:124244400-124246600 Enhancers Fetal Muscle Leg muscle
28 chr5:124244400-124246600 Enhancers Sigmoid Colon Sigmoid Colon
29 chr5:124244400-124246800 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
30 chr5:124244400-124246800 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
31 chr5:124244400-124246800 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
32 chr5:124244400-124246800 Enhancers Brain Cingulate Gyrus brain
33 chr5:124244400-124247000 Enhancers Skeletal Muscle Female skeletal muscle
34 chr5:124244600-124247000 Enhancers Brain Angular Gyrus brain
35 chr5:124244800-124245800 Weak transcription Right Atrium heart
36 chr5:124244800-124246400 Weak transcription Pancreas Pancrea
37 chr5:124244800-124246600 Enhancers Stomach Mucosa stomach
38 chr5:124244800-124246800 Enhancers iPS-18 Cell Line embryonic stem cell
39 chr5:124244800-124247200 Enhancers Fetal Heart heart
40 chr5:124244800-124248800 Weak transcription Left Ventricle heart
41 chr5:124245000-124246600 Weak transcription Fetal Brain Male brain
42 chr5:124245200-124246200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
43 chr5:124245200-124247200 Weak transcription Primary monocytes fromperipheralblood blood
44 chr5:124245400-124245800 Enhancers Pancreatic Islets Pancreatic Islet
45 chr5:124245400-124246000 Weak transcription Fetal Kidney kidney
46 chr5:124245400-124246400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
47 chr5:124245400-124246400 Weak transcription Rectal Mucosa Donor 31 rectum
48 chr5:124245400-124247000 Weak transcription Breast Myoepithelial Primary Cells Breast
49 chr5:124245400-124247400 Weak transcription Monocytes-CD14+_RO01746 blood
50 chr5:124245400-124249000 Enhancers GM12878-XiMat blood

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