Variant report
| Variant | rs13193571 |
|---|---|
| Chromosome Location | chr6:11899476-11899477 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:1)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
| No data |
| No data |
(count:1 , 50 per page) page:
1
| No. | Distal block | Cell Line | Cell type | Cell Stage |
|---|---|---|---|---|
| 1 | chr6:11898883..11901496-chr6:11906531..11909423,2 | K562 | blood: |
| No data |
| No data |
| No data |
| No data |
rSNPs within LD-proxies of this variant (count:71)
| rs_ID | r2[population] |
|---|---|
| rs12205854 | 0.83[AMR][1000 genomes];0.94[ASN][1000 genomes] |
| rs12206622 | 0.88[ASN][1000 genomes] |
| rs12333294 | 0.86[ASN][1000 genomes] |
| rs13198234 | 0.88[ASN][1000 genomes] |
| rs13198354 | 0.87[ASN][1000 genomes] |
| rs13199275 | 0.88[ASN][1000 genomes] |
| rs1830984 | 0.87[ASN][1000 genomes] |
| rs1830985 | 0.87[ASN][1000 genomes] |
| rs1985982 | 0.85[ASN][1000 genomes] |
| rs2092570 | 0.88[ASN][1000 genomes] |
| rs2092571 | 0.88[ASN][1000 genomes] |
| rs209790 | 0.88[ASN][1000 genomes] |
| rs209791 | 0.87[ASN][1000 genomes] |
| rs209792 | 0.88[ASN][1000 genomes] |
| rs209794 | 0.87[ASN][1000 genomes] |
| rs2103739 | 0.88[ASN][1000 genomes] |
| rs2746266 | 0.88[ASN][1000 genomes] |
| rs2746267 | 0.88[ASN][1000 genomes] |
| rs2765779 | 0.88[ASN][1000 genomes] |
| rs2765780 | 0.88[ASN][1000 genomes] |
| rs2765781 | 0.88[ASN][1000 genomes] |
| rs2876245 | 0.88[ASN][1000 genomes] |
| rs28768426 | 0.88[ASN][1000 genomes] |
| rs28885688 | 0.88[ASN][1000 genomes] |
| rs4711466 | 0.88[ASN][1000 genomes] |
| rs4711467 | 0.88[ASN][1000 genomes] |
| rs4711468 | 0.88[ASN][1000 genomes] |
| rs4711469 | 0.88[ASN][1000 genomes] |
| rs4714012 | 0.88[ASN][1000 genomes] |
| rs4714017 | 0.88[ASN][1000 genomes] |
| rs6457947 | 0.88[ASN][1000 genomes] |
| rs6457948 | 0.88[ASN][1000 genomes] |
| rs6457949 | 0.88[ASN][1000 genomes] |
| rs6457950 | 0.88[ASN][1000 genomes] |
| rs6457952 | 0.88[ASN][1000 genomes] |
| rs6457953 | 0.88[ASN][1000 genomes] |
| rs6457954 | 0.88[ASN][1000 genomes] |
| rs6457955 | 0.88[ASN][1000 genomes] |
| rs6457958 | 0.88[ASN][1000 genomes] |
| rs6457959 | 0.88[ASN][1000 genomes] |
| rs6457960 | 0.88[ASN][1000 genomes] |
| rs6899485 | 0.88[ASN][1000 genomes] |
| rs6901960 | 0.88[ASN][1000 genomes] |
| rs6909423 | 0.88[ASN][1000 genomes] |
| rs6909693 | 0.88[ASN][1000 genomes] |
| rs6910008 | 0.88[ASN][1000 genomes] |
| rs6910727 | 0.88[ASN][1000 genomes] |
| rs6910810 | 0.88[ASN][1000 genomes] |
| rs6911172 | 0.88[ASN][1000 genomes] |
| rs6915058 | 0.88[ASN][1000 genomes] |
| rs6916469 | 0.88[ASN][1000 genomes] |
| rs6919781 | 0.88[ASN][1000 genomes] |
| rs6926450 | 0.88[ASN][1000 genomes] |
| rs6929425 | 0.88[ASN][1000 genomes] |
| rs6932972 | 0.88[ASN][1000 genomes] |
| rs6932981 | 0.88[ASN][1000 genomes] |
| rs6934027 | 0.88[ASN][1000 genomes] |
| rs6937349 | 0.88[ASN][1000 genomes] |
| rs6937513 | 0.88[ASN][1000 genomes] |
| rs6940133 | 0.88[ASN][1000 genomes] |
| rs6941984 | 0.88[ASN][1000 genomes] |
| rs7452547 | 0.88[ASN][1000 genomes] |
| rs7738835 | 0.88[ASN][1000 genomes] |
| rs7743217 | 0.89[ASN][1000 genomes] |
| rs7746759 | 0.88[ASN][1000 genomes] |
| rs7762981 | 0.88[ASN][1000 genomes] |
| rs7767282 | 0.88[ASN][1000 genomes] |
| rs7776229 | 0.88[ASN][1000 genomes] |
| rs9296195 | 0.86[ASN][1000 genomes] |
| rs9368945 | 0.83[ASN][1000 genomes] |
| rs9470408 | 0.88[ASN][1000 genomes] |
| No data |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr6:11894800-11900200 | Weak transcription | H1 Cell Line | embryonic stem cell |
