Variant report

Variant rs13194402
Chromosome Location chr6:31707344-31707345
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:127 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:31702400-31708800 Flanking Active TSS Primary hematopoietic stem cells blood
2 chr6:31704200-31709000 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
3 chr6:31704200-31709000 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
4 chr6:31704400-31707400 Enhancers Spleen Spleen
5 chr6:31704400-31707400 Flanking Active TSS Dnd41 blood
6 chr6:31704400-31707600 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
7 chr6:31704400-31707600 Flanking Active TSS Fetal Thymus thymus
8 chr6:31704400-31708800 Flanking Active TSS Primary hematopoietic stem cells short term culture blood
9 chr6:31704400-31709000 Flanking Active TSS Primary neutrophils fromperipheralblood blood
10 chr6:31704600-31707400 Weak transcription Ovary ovary
11 chr6:31704600-31707600 Flanking Active TSS Rectal Mucosa Donor 29 rectum
12 chr6:31704600-31707600 Flanking Active TSS Monocytes-CD14+_RO01746 blood
13 chr6:31704600-31707800 Enhancers Placenta Amnion Placenta Amnion
14 chr6:31704800-31707800 Weak transcription Aorta Aorta
15 chr6:31705000-31707400 Weak transcription Right Atrium heart
16 chr6:31705000-31707600 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
17 chr6:31705000-31707600 Enhancers Placenta Placenta
18 chr6:31705200-31707400 Flanking Active TSS K562 blood
19 chr6:31705400-31707400 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
20 chr6:31705400-31707400 Flanking Active TSS Rectal Mucosa Donor 31 rectum
21 chr6:31705400-31707400 Flanking Active TSS Hela-S3 cervix
22 chr6:31705600-31707400 Flanking Active TSS H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
23 chr6:31705600-31707400 Flanking Active TSS NHEK skin
24 chr6:31705600-31707800 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
25 chr6:31706000-31707400 Enhancers Fetal Heart heart
26 chr6:31706200-31707400 Enhancers Primary B cells from peripheral blood blood
27 chr6:31706200-31707400 Enhancers Primary Natural Killer cells fromperipheralblood blood
28 chr6:31706200-31707400 Enhancers Primary T killer naive cells fromperipheralblood blood
29 chr6:31706400-31707400 Enhancers Primary T helper cells fromperipheralblood blood
30 chr6:31706400-31707600 Enhancers Primary mononuclear cells fromperipheralblood Blood
31 chr6:31706400-31707600 Weak transcription Gastric stomach
32 chr6:31706600-31707400 Enhancers Primary T helper memory cells from peripheral blood 1 blood
33 chr6:31706600-31707400 Enhancers Primary T helper 17 cells PMA-I stimulated --
34 chr6:31706600-31707400 Enhancers Esophagus oesophagus
35 chr6:31706600-31707600 Weak transcription Left Ventricle heart
36 chr6:31706600-31707800 Weak transcription Lung lung
37 chr6:31706600-31708800 Active TSS Foreskin Melanocyte Primary Cells skin01 Skin
38 chr6:31706600-31708800 Active TSS A549 lung
39 chr6:31706800-31708800 Active TSS ES-I3 Cell Line embryonic stem cell
40 chr6:31707000-31707400 Flanking Active TSS H9 Derived Neuron Cultured Cells ES cell derived
41 chr6:31707000-31707400 Flanking Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
42 chr6:31707000-31707400 Flanking Active TSS hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
43 chr6:31707000-31707400 Flanking Active TSS HUES64 Cell Line embryonic stem cell
44 chr6:31707000-31707400 Flanking Active TSS iPS-15b Cell Line embryonic stem cell
45 chr6:31707000-31707400 Flanking Active TSS iPS-18 Cell Line embryonic stem cell
46 chr6:31707000-31707400 Flanking Active TSS iPS-20b Cell Line embryonic stem cell
47 chr6:31707000-31707400 Flanking Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
48 chr6:31707000-31707400 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
49 chr6:31707000-31707400 Flanking Active TSS Muscle Satellite Cultured Cells --
50 chr6:31707000-31707400 Flanking Active TSS Cortex derived primary cultured neurospheres brain

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