Variant report

Variant rs34568880
Chromosome Location chr6:31514448-31514449
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:122 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:31510600-31514600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
2 chr6:31510600-31514600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
3 chr6:31510600-31515800 Weak transcription Gastric stomach
4 chr6:31510800-31514600 Weak transcription Small Intestine intestine
5 chr6:31510800-31515400 Weak transcription Lung lung
6 chr6:31511000-31514600 Weak transcription Right Ventricle heart
7 chr6:31511200-31514600 Weak transcription Pancreas Pancrea
8 chr6:31511600-31514600 Weak transcription Psoas Muscle Psoas
9 chr6:31513200-31514800 Flanking Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
10 chr6:31513200-31515800 Active TSS H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
11 chr6:31513400-31514600 Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
12 chr6:31513400-31515000 Flanking Active TSS Brain Germinal Matrix brain
13 chr6:31513400-31515800 Active TSS Brain Angular Gyrus brain
14 chr6:31513600-31514600 Flanking Active TSS Brain Anterior Caudate brain
15 chr6:31513600-31514600 Flanking Active TSS Brain Substantia Nigra brain
16 chr6:31513600-31515800 Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
17 chr6:31513600-31515800 Active TSS NHDF-Ad bronchial
18 chr6:31513600-31516000 Active TSS iPS-15b Cell Line embryonic stem cell
19 chr6:31513600-31516000 Active TSS iPS-20b Cell Line embryonic stem cell
20 chr6:31513600-31516200 Active TSS HUES64 Cell Line embryonic stem cell
21 chr6:31513800-31514600 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
22 chr6:31513800-31514600 Flanking Active TSS Brain Cingulate Gyrus brain
23 chr6:31513800-31514600 Flanking Active TSS Fetal Muscle Trunk muscle
24 chr6:31513800-31514600 Enhancers Rectal Mucosa Donor 31 rectum
25 chr6:31513800-31514600 Enhancers NHEK skin
26 chr6:31513800-31514800 Flanking Active TSS Fetal Muscle Leg muscle
27 chr6:31513800-31514800 Flanking Active TSS Fetal Stomach stomach
28 chr6:31513800-31515000 Flanking Active TSS Foreskin Melanocyte Primary Cells skin03 Skin
29 chr6:31513800-31515000 Flanking Active TSS Stomach Smooth Muscle stomach
30 chr6:31513800-31515200 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
31 chr6:31513800-31515200 Flanking Active TSS Dnd41 blood
32 chr6:31513800-31515600 Active TSS H9 Cell Line embryonic stem cell
33 chr6:31514000-31514600 Enhancers Primary T cells from cord blood blood
34 chr6:31514000-31514600 Enhancers Primary T cells fromperipheralblood blood
35 chr6:31514000-31514600 Enhancers Primary hematopoietic stem cells blood
36 chr6:31514000-31514600 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
37 chr6:31514000-31514600 Enhancers Liver Liver
38 chr6:31514000-31515000 Flanking Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
39 chr6:31514000-31515200 Active TSS iPS DF 19.11 Cell Line embryonic stem cell
40 chr6:31514000-31515200 Flanking Active TSS Fetal Adrenal Gland Adrenal Gland
41 chr6:31514000-31515600 Active TSS ES-WA7 Cell Line embryonic stem cell
42 chr6:31514000-31515800 Active TSS H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
43 chr6:31514000-31515800 Active TSS IMR90 fetal lung fibroblasts Cell Line lung
44 chr6:31514000-31515800 Active TSS Fetal Intestine Small intestine
45 chr6:31514000-31515800 Active TSS Fetal Lung lung
46 chr6:31514000-31515800 Active TSS HSMMtube muscle
47 chr6:31514000-31516000 Active TSS HUES48 Cell Line embryonic stem cell
48 chr6:31514000-31516000 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
49 chr6:31514000-31516000 Flanking Active TSS Fetal Thymus thymus
50 chr6:31514000-31516400 Active TSS Fetal Kidney kidney

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