Variant report

Variant rs13206899
Chromosome Location chr6:32427581-32427582
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:52 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:32427000-32428000 Active TSS HMEC breast
2 chr6:32427000-32428400 Bivalent/Poised TSS Foreskin Keratinocyte Primary Cells skin03 Skin
3 chr6:32427200-32427800 Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
4 chr6:32427200-32427800 Active TSS Rectal Smooth Muscle rectum
5 chr6:32427200-32428000 Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
6 chr6:32427200-32428000 Bivalent/Poised TSS Breast Myoepithelial Primary Cells Breast
7 chr6:32427200-32428000 Bivalent/Poised TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
8 chr6:32427200-32428000 Bivalent/Poised TSS Foreskin Melanocyte Primary Cells skin03 Skin
9 chr6:32427200-32428000 Bivalent/Poised TSS Adipose Nuclei Adipose
10 chr6:32427200-32428000 Bivalent/Poised TSS Esophagus oesophagus
11 chr6:32427200-32428000 Bivalent/Poised TSS Fetal Brain Female brain
12 chr6:32427200-32428000 Active TSS Fetal Kidney kidney
13 chr6:32427200-32428000 Bivalent/Poised TSS Rectal Mucosa Donor 31 rectum
14 chr6:32427200-32428000 Bivalent/Poised TSS Skeletal Muscle Female skeletal muscle
15 chr6:32427200-32428000 Bivalent/Poised TSS NHLF lung
16 chr6:32427200-32428200 Bivalent/Poised TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
17 chr6:32427200-32428200 Bivalent/Poised TSS Foreskin Keratinocyte Primary Cells skin02 Skin
18 chr6:32427200-32428200 Bivalent/Poised TSS Duodenum Mucosa Duodenum
19 chr6:32427200-32428200 Bivalent/Poised TSS NHEK skin
20 chr6:32427400-32427600 Bivalent/Poised TSS Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
21 chr6:32427400-32427600 Flanking Active TSS Primary B cells from peripheral blood blood
22 chr6:32427400-32427600 Enhancers Primary hematopoietic stem cells short term culture blood
23 chr6:32427400-32427600 Bivalent Enhancer Primary T helper naive cells from peripheral blood blood
24 chr6:32427400-32427600 Bivalent/Poised TSS Brain Inferior Temporal Lobe brain
25 chr6:32427400-32427600 Bivalent/Poised TSS Fetal Intestine Small intestine
26 chr6:32427400-32427600 Bivalent/Poised TSS Fetal Lung lung
27 chr6:32427400-32427600 Flanking Active TSS Gastric stomach
28 chr6:32427400-32427600 Transcr. at gene 5' and 3' Pancreas Pancrea
29 chr6:32427400-32427600 Active TSS GM12878-XiMat blood
30 chr6:32427400-32427800 Active TSS Primary monocytes fromperipheralblood blood
31 chr6:32427400-32427800 Bivalent/Poised TSS Foreskin Fibroblast Primary Cells skin01 Skin
32 chr6:32427400-32427800 Active TSS Colonic Mucosa Colon
33 chr6:32427400-32427800 Bivalent/Poised TSS Colon Smooth Muscle Colon
34 chr6:32427400-32427800 Bivalent/Poised TSS Fetal Stomach stomach
35 chr6:32427400-32427800 Bivalent/Poised TSS Left Ventricle heart
36 chr6:32427400-32427800 Flanking Active TSS Spleen Spleen
37 chr6:32427400-32427800 Active TSS NHDF-Ad bronchial
38 chr6:32427400-32428000 Active TSS IMR90 fetal lung fibroblasts Cell Line lung
39 chr6:32427400-32428000 Active TSS Primary hematopoietic stem cells blood
40 chr6:32427400-32428000 Active TSS Brain Hippocampus Middle brain
41 chr6:32427400-32428000 Bivalent/Poised TSS Duodenum Smooth Muscle Duodenum
42 chr6:32427400-32428000 Bivalent/Poised TSS Fetal Adrenal Gland Adrenal Gland
43 chr6:32427400-32428000 Bivalent/Poised TSS Fetal Muscle Trunk muscle
44 chr6:32427400-32428000 Bivalent/Poised TSS Fetal Muscle Leg muscle
45 chr6:32427400-32428000 Active TSS Rectal Mucosa Donor 29 rectum
46 chr6:32427400-32428000 Bivalent/Poised TSS A549 lung
47 chr6:32427400-32428000 Bivalent/Poised TSS Monocytes-CD14+_RO01746 blood
48 chr6:32427400-32428200 Active TSS HUES48 Cell Line embryonic stem cell
49 chr6:32427400-32428200 Bivalent/Poised TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
50 chr6:32427400-32428200 Flanking Bivalent TSS/Enh Primary hematopoietic stem cells G-CSF-mobilized Male --

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