Variant report

Variant	rs13216650
Chromosome Location	chr6:69620033-69620034
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 43 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:39)

rs_ID	r²[population]
rs1008234	0.81[ASN][1000 genomes]
rs10223798	0.84[ASN][1000 genomes]
rs10485437	0.95[ASN][1000 genomes]
rs1120258	0.84[ASN][1000 genomes]
rs11751644	0.84[ASN][1000 genomes]
rs11967772	0.84[ASN][1000 genomes]
rs13190995	0.91[ASN][1000 genomes]
rs13191427	0.91[ASN][1000 genomes]
rs13195099	0.84[ASN][1000 genomes]
rs13199576	0.81[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs13201188	0.95[ASN][1000 genomes]
rs13204176	0.94[ASN][1000 genomes]
rs13204246	0.81[ASN][1000 genomes]
rs13208434	0.84[ASN][1000 genomes]
rs13210533	0.82[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs13210818	0.95[ASN][1000 genomes]
rs13215030	0.95[ASN][1000 genomes]
rs13217051	0.84[ASN][1000 genomes]
rs1523933	0.81[ASN][1000 genomes]
rs16900333	0.95[ASN][1000 genomes]
rs17200696	0.81[ASN][1000 genomes]
rs1916767	0.84[ASN][1000 genomes]
rs1932615	0.98[ASN][1000 genomes]
rs2184723	0.95[ASN][1000 genomes]
rs62416371	0.84[ASN][1000 genomes]
rs62418573	0.81[ASN][1000 genomes]
rs66779956	0.81[ASN][1000 genomes]
rs6936651	0.84[ASN][1000 genomes]
rs73458284	0.81[ASN][1000 genomes]
rs7742022	0.81[ASN][1000 genomes]
rs7754330	0.84[ASN][1000 genomes]
rs7755226	0.81[ASN][1000 genomes]
rs7760666	0.82[AMR][1000 genomes];0.95[ASN][1000 genomes]
rs9294813	0.80[AMR][1000 genomes];0.95[ASN][1000 genomes]
rs9446064	0.80[AMR][1000 genomes];0.93[ASN][1000 genomes]
rs9446067	0.82[AMR][1000 genomes];0.95[ASN][1000 genomes]
rs9454643	0.82[AMR][1000 genomes];0.95[ASN][1000 genomes]
rs9454645	0.82[AMR][1000 genomes];0.95[ASN][1000 genomes]
rs996768	0.81[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv470831	chr6:69581991-69654650	Weak transcription Enhancers ZNF genes & repeats Strong transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
2	nsv886136	chr6:69598297-69654650	Weak transcription Strong transcription ZNF genes & repeats Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
3	nsv525968	chr6:69618480-69638504	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
4	nsv519494	chr6:69619007-69638504	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:69602800-69621000	Weak transcription	Fetal Lung	lung

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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