The 2.0 version of rSNPBase

Variant report

Variant rs13220949
Chromosome Location chr7:99247793-99247794
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:68 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:99228400-99258000 Weak transcription Colon Smooth Muscle Colon
2 chr7:99228400-99258800 Weak transcription Ovary ovary
3 chr7:99228800-99249000 Weak transcription Small Intestine intestine
4 chr7:99229200-99267400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
5 chr7:99229200-99275000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
6 chr7:99229400-99257400 Weak transcription Fetal Lung lung
7 chr7:99229400-99257800 Weak transcription Duodenum Smooth Muscle Duodenum
8 chr7:99229800-99255400 Weak transcription Primary T helper naive cells from peripheral blood blood
9 chr7:99229800-99257200 Weak transcription Esophagus oesophagus
10 chr7:99229800-99257600 Weak transcription Pancreas Pancrea
11 chr7:99229800-99260200 Weak transcription Left Ventricle heart
12 chr7:99229800-99272600 Weak transcription Primary T killer naive cells fromperipheralblood blood
13 chr7:99230200-99257200 Weak transcription Gastric stomach
14 chr7:99230400-99249000 Weak transcription Colonic Mucosa Colon
15 chr7:99230400-99257600 Weak transcription Rectal Smooth Muscle rectum
16 chr7:99230400-99272000 Weak transcription Primary T helper cells PMA-I stimulated --
17 chr7:99230800-99258000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
18 chr7:99231400-99248800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
19 chr7:99231600-99252400 Weak transcription Monocytes-CD14+_RO01746 blood
20 chr7:99231800-99247800 Weak transcription Sigmoid Colon Sigmoid Colon
21 chr7:99231800-99250000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
22 chr7:99231800-99258000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
23 chr7:99231800-99258000 Weak transcription Brain Substantia Nigra brain
24 chr7:99231800-99260200 Weak transcription K562 blood
25 chr7:99231800-99264600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
26 chr7:99231800-99268000 Weak transcription Brain Anterior Caudate brain
27 chr7:99231800-99268600 Weak transcription HepG2 liver
28 chr7:99232000-99258600 Weak transcription Primary B cells from cord blood blood
29 chr7:99232000-99275000 Weak transcription A549 lung
30 chr7:99232200-99250600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
31 chr7:99233000-99266000 Weak transcription NHEK skin
32 chr7:99235800-99276400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
33 chr7:99236600-99251000 Weak transcription Lung lung
34 chr7:99236800-99258400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
35 chr7:99236800-99260400 Weak transcription Breast Myoepithelial Primary Cells Breast
36 chr7:99236800-99263000 Weak transcription Placenta Placenta
37 chr7:99237000-99272200 Weak transcription Primary T helper naive cells fromperipheralblood blood
38 chr7:99237200-99249200 Weak transcription Fetal Intestine Small intestine
39 chr7:99237200-99258000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
40 chr7:99237200-99258800 Weak transcription Primary B cells from peripheral blood blood
41 chr7:99237200-99264800 Weak transcription Right Ventricle heart
42 chr7:99241000-99268800 Weak transcription Primary T cells fromperipheralblood blood
43 chr7:99241600-99264600 Weak transcription Brain Inferior Temporal Lobe brain
44 chr7:99242200-99258800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
45 chr7:99242200-99261400 Weak transcription HSMMtube muscle
46 chr7:99242400-99272400 Weak transcription Primary T regulatory cells fromperipheralblood blood
47 chr7:99242800-99249000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
48 chr7:99242800-99261000 Weak transcription Aorta Aorta
49 chr7:99242800-99267600 Weak transcription GM12878-XiMat blood
50 chr7:99243000-99249000 Weak transcription Adipose Nuclei Adipose

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Last update: Aug 31, 2015