Variant report

rSNPs within LD-proxies of this variant (count:24)

rs_ID	r²[population]
rs10228919	0.86[EUR][1000 genomes]
rs12113753	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs12375109	0.87[EUR][1000 genomes]
rs13223489	0.87[EUR][1000 genomes]
rs13246547	0.84[EUR][1000 genomes]
rs17168896	0.90[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs324641	0.81[AMR][1000 genomes]
rs324646	0.81[AMR][1000 genomes]
rs324647	0.81[AMR][1000 genomes]
rs324648	0.81[AMR][1000 genomes]
rs324651	0.81[AMR][1000 genomes]
rs34093134	0.85[EUR][1000 genomes]
rs34634747	0.87[EUR][1000 genomes]
rs34649110	0.87[EUR][1000 genomes]
rs34907276	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs35219717	0.81[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs35319640	0.87[EUR][1000 genomes]
rs35568948	0.86[EUR][1000 genomes]
rs35681063	0.87[EUR][1000 genomes]
rs36078565	0.87[EUR][1000 genomes]
rs67532040	0.92[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs71541337	0.87[EUR][1000 genomes]
rs71541338	0.87[EUR][1000 genomes]
rs73447194	0.88[AFR][1000 genomes];0.96[AMR][1000 genomes];0.99[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1029192	chr7:136433278-137147566	Weak transcription Enhancers Flanking Active TSS Bivalent Enhancer Active TSS Strong transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	23 gene(s)	inside rSNPs	diseases
2	nsv831147	chr7:136583444-136755741	Enhancers Weak transcription ZNF genes & repeats Strong transcription Flanking Active TSS Genic enhancers Active TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	8 gene(s)	inside rSNPs	diseases
3	esv2753059	chr7:136633745-136893745	Enhancers Weak transcription Flanking Active TSS Active TSS Genic enhancers ZNF genes & repeats Strong transcription Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	8 gene(s)	inside rSNPs	diseases
4	nsv889237	chr7:136715167-136793350	Enhancers Weak transcription Flanking Active TSS Active TSS Genic enhancers ZNF genes & repeats	Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:136711600-136721400	Weak transcription	Colon Smooth Muscle	Colon
2	chr7:136717400-136717800	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
3	chr7:136717400-136718000	Enhancers	Foreskin Fibroblast Primary Cells skin02	Skin

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