Variant report

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs10228919	0.87[EUR][1000 genomes]
rs12113753	0.81[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs12375109	0.91[AFR][1000 genomes];0.87[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs13223489	0.91[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs13229637	0.81[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs13244570	0.83[AFR][1000 genomes]
rs13246547	0.91[AFR][1000 genomes];0.91[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs17168896	0.84[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs34093134	0.91[AFR][1000 genomes];0.91[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs34539155	0.82[AMR][1000 genomes]
rs34634747	0.91[AFR][1000 genomes];0.87[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs34649110	0.91[AFR][1000 genomes];0.87[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs34907276	0.81[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs35319640	0.91[AFR][1000 genomes];0.91[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs35568948	0.91[AFR][1000 genomes];0.87[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs35681063	0.84[AFR][1000 genomes];0.87[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs36078565	0.91[AFR][1000 genomes];0.87[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs67532040	0.81[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs71541337	0.91[AFR][1000 genomes];0.87[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs71541338	0.91[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs73447194	0.84[AMR][1000 genomes];0.98[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1029192	chr7:136433278-137147566	Weak transcription Enhancers Flanking Active TSS Bivalent Enhancer Active TSS Strong transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	23 gene(s)	inside rSNPs	diseases
2	nsv831147	chr7:136583444-136755741	Enhancers Weak transcription ZNF genes & repeats Strong transcription Flanking Active TSS Genic enhancers Active TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	8 gene(s)	inside rSNPs	diseases
3	esv2753059	chr7:136633745-136893745	Enhancers Weak transcription Flanking Active TSS Active TSS Genic enhancers ZNF genes & repeats Strong transcription Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	8 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:11 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:136692600-136710600	Weak transcription	NHLF	lung
2	chr7:136700400-136717400	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
3	chr7:136700600-136710600	Weak transcription	Colon Smooth Muscle	Colon
4	chr7:136701000-136710400	Weak transcription	Fetal Stomach	stomach
5	chr7:136701000-136712000	Weak transcription	Left Ventricle	heart
6	chr7:136708600-136709600	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
7	chr7:136708600-136709600	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
8	chr7:136708800-136709400	Enhancers	Fetal Heart	heart
9	chr7:136709000-136709400	Weak transcription	Stomach Smooth Muscle	stomach
10	chr7:136709000-136710200	Weak transcription	Rectal Smooth Muscle	rectum
11	chr7:136709200-136710600	Weak transcription	Placenta Amnion	Placenta Amnion

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