Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr22:29560241..29562794-chr22:29564787..29567171,2	K562	blood:

rSNPs within LD-proxies of this variant (count:24)

rs_ID	r²[population]
rs132308	0.97[EUR][1000 genomes]
rs132311	0.91[EUR][1000 genomes]
rs132312	0.97[EUR][1000 genomes]
rs132313	0.86[EUR][1000 genomes]
rs132314	0.84[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs132316	1.00[AFR][1000 genomes];0.84[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs132317	0.97[EUR][1000 genomes]
rs132321	0.84[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs132323	0.97[EUR][1000 genomes]
rs132341	0.85[EUR][1000 genomes]
rs132348	0.85[EUR][1000 genomes]
rs132350	0.82[EUR][1000 genomes]
rs132351	0.82[EUR][1000 genomes]
rs132354	0.82[EUR][1000 genomes]
rs132358	0.85[ASN][1000 genomes]
rs132366	0.82[EUR][1000 genomes]
rs132367	0.82[EUR][1000 genomes]
rs132370	0.87[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs132373	0.82[EUR][1000 genomes]
rs132378	0.82[EUR][1000 genomes]
rs132380	0.82[EUR][1000 genomes]
rs469984	0.97[EUR][1000 genomes]
rs469985	0.82[EUR][1000 genomes]
rs713924	1.00[AFR][1000 genomes];0.84[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv531586	chr22:29252132-29902266	Enhancers Weak transcription Active TSS Strong transcription Flanking Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	46 gene(s)	inside rSNPs	diseases
2	nsv524483	chr22:29525126-29630337	Weak transcription Flanking Bivalent TSS/Enh Strong transcription Enhancers Flanking Active TSS Genic enhancers Active TSS ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	12 gene(s)	inside rSNPs	diseases
3	nsv817986	chr22:29540297-29568963	Weak transcription Bivalent Enhancer Enhancers Genic enhancers Strong transcription Active TSS Flanking Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS	Chromatin interactive region lncRNA miRNA target site	8 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:9 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr22:29554600-29563400	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr22:29561200-29566000	Enhancers	Primary hematopoietic stem cells short term culture	blood
3	chr22:29561400-29562200	Enhancers	GM12878-XiMat	blood
4	chr22:29561400-29563000	Enhancers	Dnd41	blood
5	chr22:29561400-29563200	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
6	chr22:29561600-29564000	Enhancers	Spleen	Spleen
7	chr22:29561800-29564000	Enhancers	Primary Natural Killer cells fromperipheralblood	blood
8	chr22:29561800-29564600	Enhancers	Primary B cells from peripheral blood	blood
9	chr22:29562000-29562200	Flanking Bivalent TSS/Enh	H1 Derived Mesenchymal Stem Cells	ES cell derived

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