Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr22:29570359..29573070-chr22:29578179..29579900,2	K562	blood:

rSNPs within LD-proxies of this variant (count:25)

rs_ID	r²[population]
rs132308	0.82[CEU][hapmap]
rs132314	0.82[CEU][hapmap]
rs132326	0.86[AMR][1000 genomes];0.93[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs132335	0.92[ASN][1000 genomes]
rs132337	0.96[ASN][1000 genomes]
rs132346	0.84[AMR][1000 genomes];0.94[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs132347	0.86[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs132348	0.82[CEU][hapmap]
rs132350	0.82[CEU][hapmap]
rs132355	0.94[ASN][1000 genomes]
rs132361	0.93[ASN][1000 genomes]
rs132362	0.90[CHB][hapmap];0.82[JPT][hapmap];0.93[ASN][1000 genomes]
rs132364	0.93[ASN][1000 genomes]
rs132366	0.82[CEU][hapmap]
rs132367	0.82[CEU][hapmap]
rs132368	0.90[CHB][hapmap];0.88[JPT][hapmap];0.89[ASN][1000 genomes]
rs132369	0.90[CHB][hapmap];0.81[JPT][hapmap];0.93[ASN][1000 genomes]
rs132370	0.82[CEU][hapmap]
rs132373	0.82[CEU][hapmap]
rs132377	0.82[CEU][hapmap]
rs132380	0.82[CEU][hapmap]
rs132382	0.82[CEU][hapmap]
rs132386	0.82[CEU][hapmap]
rs1573711	0.93[ASN][1000 genomes]
rs713924	0.82[CEU][hapmap]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv531586	chr22:29252132-29902266	Enhancers Weak transcription Active TSS Strong transcription Flanking Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	46 gene(s)	inside rSNPs	diseases
2	nsv524483	chr22:29525126-29630337	Weak transcription Flanking Bivalent TSS/Enh Strong transcription Enhancers Flanking Active TSS Genic enhancers Active TSS ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	12 gene(s)	inside rSNPs	diseases
3	esv3418371	chr22:29569447-29595319	Enhancers Strong transcription ZNF genes & repeats Flanking Active TSS Weak transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers	TF binding region Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:16 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr22:29572800-29591000	Weak transcription	Spleen	Spleen
2	chr22:29573400-29580400	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
3	chr22:29575400-29579800	Weak transcription	Brain Germinal Matrix	brain
4	chr22:29576000-29579200	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
5	chr22:29576400-29591000	Weak transcription	Primary hematopoietic stem cells	blood
6	chr22:29576600-29580000	Weak transcription	Fetal Stomach	stomach
7	chr22:29576600-29580200	Weak transcription	Brain Cingulate Gyrus	brain
8	chr22:29576600-29583800	Weak transcription	Fetal Lung	lung
9	chr22:29576600-29590400	Weak transcription	Primary hematopoietic stem cells short term culture	blood
10	chr22:29576600-29591200	Weak transcription	Fetal Intestine Small	intestine
11	chr22:29576800-29580400	Weak transcription	Fetal Brain Female	brain
12	chr22:29577000-29580200	Weak transcription	Fetal Brain Male	brain
13	chr22:29577600-29591200	Weak transcription	Dnd41	blood
14	chr22:29578400-29578600	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
15	chr22:29578400-29578600	Enhancers	HepG2	liver
16	chr22:29578400-29579200	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--

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