Variant report

Variant	rs13252273
Chromosome Location	chr8:130304816-130304817
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 9 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:5)

rs_ID	r²[population]
rs13255648	1.00[EUR][1000 genomes]
rs34515997	1.00[AFR][1000 genomes]
rs35354692	1.00[AFR][1000 genomes]
rs35780345	1.00[AFR][1000 genomes]
rs71522545	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv831460	chr8:130185680-130366217	Weak transcription Enhancers Active TSS Flanking Active TSS ZNF genes & repeats Genic enhancers Strong transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
2	esv3379374	chr8:130304689-130304842	Weak transcription Enhancers	n/a	n/a	inside rSNPs	n/a
3	esv3511891	chr8:130304699-130304843	Enhancers Weak transcription	n/a	n/a	inside rSNPs	n/a
4	esv3511892	chr8:130304703-130304841	Weak transcription Enhancers	n/a	n/a	inside rSNPs	n/a

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:130291600-130305600	Weak transcription	K562	blood
2	chr8:130304000-130308800	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
3	chr8:130304800-130305400	Enhancers	Osteobl	bone
4	chr8:130304800-130305800	Enhancers	Dnd41	blood
5	chr8:130304800-130307200	Weak transcription	Muscle Satellite Cultured Cells	--

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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