The 2.0 version of rSNPBase

Variant report

Variant rs13279371
Chromosome Location chr8:100419234-100419235
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:60 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr8:100384400-100437600 Weak transcription Lung lung
2 chr8:100386000-100428800 Weak transcription Esophagus oesophagus
3 chr8:100390000-100421200 Weak transcription Primary T killer naive cells fromperipheralblood blood
4 chr8:100390400-100421200 Weak transcription Aorta Aorta
5 chr8:100391000-100428000 Weak transcription Pancreas Pancrea
6 chr8:100391400-100419800 Weak transcription Fetal Muscle Trunk muscle
7 chr8:100391400-100430200 Weak transcription Brain Angular Gyrus brain
8 chr8:100393600-100445200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
9 chr8:100394000-100420000 Weak transcription Fetal Intestine Small intestine
10 chr8:100394000-100420200 Weak transcription Fetal Intestine Large intestine
11 chr8:100395400-100420200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
12 chr8:100395400-100432600 Weak transcription Psoas Muscle Psoas
13 chr8:100395600-100421000 Weak transcription Sigmoid Colon Sigmoid Colon
14 chr8:100396200-100430000 Weak transcription HSMMtube muscle
15 chr8:100397000-100420800 Weak transcription Adipose Nuclei Adipose
16 chr8:100397200-100420400 Weak transcription Primary T helper naive cells fromperipheralblood blood
17 chr8:100397400-100424000 Weak transcription Primary T cells fromperipheralblood blood
18 chr8:100397800-100445000 Weak transcription HSMM muscle
19 chr8:100399800-100419800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
20 chr8:100399800-100445400 Weak transcription Primary T helper naive cells from peripheral blood blood
21 chr8:100399800-100498400 Weak transcription Thymus Thymus
22 chr8:100403200-100424600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
23 chr8:100404400-100420000 Weak transcription Rectal Mucosa Donor 31 rectum
24 chr8:100404400-100420200 Weak transcription Primary B cells from peripheral blood blood
25 chr8:100404400-100420200 Weak transcription Liver Liver
26 chr8:100404400-100420400 Weak transcription Primary T helper cells fromperipheralblood blood
27 chr8:100404400-100420600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
28 chr8:100404400-100420600 Weak transcription Duodenum Smooth Muscle Duodenum
29 chr8:100404400-100420800 Weak transcription Duodenum Mucosa Duodenum
30 chr8:100404400-100421000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
31 chr8:100404400-100424600 Weak transcription Primary T helper cells PMA-I stimulated --
32 chr8:100404400-100427600 Weak transcription Dnd41 blood
33 chr8:100404400-100427800 Weak transcription Stomach Smooth Muscle stomach
34 chr8:100404400-100428800 Weak transcription Left Ventricle heart
35 chr8:100404400-100430800 Weak transcription Ovary ovary
36 chr8:100404400-100441800 Weak transcription Skeletal Muscle Female skeletal muscle
37 chr8:100404400-100444600 Weak transcription Placenta Placenta
38 chr8:100404600-100423600 Weak transcription Primary T regulatory cells fromperipheralblood blood
39 chr8:100404800-100424800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
40 chr8:100409000-100423000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
41 chr8:100410400-100422400 Weak transcription Primary B cells from cord blood blood
42 chr8:100410800-100423800 Weak transcription Primary hematopoietic stem cells short term culture blood
43 chr8:100415000-100420000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
44 chr8:100415000-100420200 Weak transcription Primary hematopoietic stem cells blood
45 chr8:100415200-100421200 Weak transcription Brain Hippocampus Middle brain
46 chr8:100416200-100420600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
47 chr8:100416200-100445200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
48 chr8:100416400-100423800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
49 chr8:100416800-100419400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
50 chr8:100417200-100420400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived

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Last update: Aug 31, 2015