Variant report

Variant	rs13279758
Chromosome Location	chr8:59236086-59236087
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 29 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:28)

rs_ID	r²[population]
rs10504252	0.86[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs13248215	0.82[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs13269231	0.84[AMR][1000 genomes];0.87[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs13270284	0.84[AMR][1000 genomes];0.87[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs13272948	0.87[EUR][1000 genomes]
rs13274962	0.87[EUR][1000 genomes]
rs13275601	0.84[AMR][1000 genomes];0.84[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs16923355	0.83[AMR][1000 genomes];0.87[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs34333385	0.84[AMR][1000 genomes];0.87[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs4496957	0.84[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs4737494	0.83[EUR][1000 genomes]
rs4738666	0.82[AMR][1000 genomes];0.86[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs4738667	0.84[AMR][1000 genomes];0.87[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs4738668	0.88[AMR][1000 genomes];0.86[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs4738669	0.88[AMR][1000 genomes];0.86[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs4738670	0.84[AMR][1000 genomes];0.87[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs62512354	0.81[EUR][1000 genomes]
rs6989401	0.90[AMR][1000 genomes];0.90[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs6989503	0.83[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs7006132	0.81[AMR][1000 genomes];0.86[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs7011612	0.83[AMR][1000 genomes];0.86[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs721518	0.82[AMR][1000 genomes];0.87[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs7818992	0.82[AMR][1000 genomes];0.87[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs7827651	0.84[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs7830983	0.81[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs7831095	0.81[AMR][1000 genomes];0.87[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs7834713	0.84[AMR][1000 genomes];0.87[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs7837145	0.87[EUR][1000 genomes];0.81[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2761427	chr8:59204373-59242564	Enhancers Weak transcription Active TSS Flanking Active TSS Bivalent Enhancer ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:59229400-59241600	Weak transcription	Right Atrium	heart
2	chr8:59229800-59236400	Weak transcription	Spleen	Spleen
3	chr8:59231000-59236400	Weak transcription	Left Ventricle	heart
4	chr8:59234600-59236400	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
5	chr8:59235200-59236200	Weak transcription	Primary T cells from cord blood	blood

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