Variant report

Variant	rs13283334
Chromosome Location	chr9:117531782-117531783
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 9 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:9)

rs_ID	r²[population]
rs10982391	0.81[AMR][1000 genomes];0.81[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs13286148	0.82[AMR][1000 genomes];0.88[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs13286957	0.81[AMR][1000 genomes];0.81[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs13293384	0.82[AMR][1000 genomes];0.82[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs13297988	0.85[ASN][1000 genomes]
rs2185935	0.81[AMR][1000 genomes];0.82[ASN][1000 genomes]
rs56135551	0.81[AMR][1000 genomes];0.81[ASN][1000 genomes]
rs7038417	0.81[AMR][1000 genomes];0.82[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs7846744	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:16 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:117525800-117533000	Weak transcription	Aorta	Aorta
2	chr9:117529400-117532600	Enhancers	Fetal Intestine Large	intestine
3	chr9:117529800-117533400	Weak transcription	Esophagus	oesophagus
4	chr9:117531200-117532600	Enhancers	Fetal Intestine Small	intestine
5	chr9:117531400-117531800	Enhancers	Gastric	stomach
6	chr9:117531400-117532600	Enhancers	Fetal Thymus	thymus
7	chr9:117531400-117532800	Enhancers	Fetal Lung	lung
8	chr9:117531400-117533400	Enhancers	Brain Germinal Matrix	brain
9	chr9:117531600-117531800	Bivalent Enhancer	Sigmoid Colon	Sigmoid Colon
10	chr9:117531600-117532000	Enhancers	Fetal Brain Male	brain
11	chr9:117531600-117532000	Enhancers	Fetal Kidney	kidney
12	chr9:117531600-117532200	Enhancers	Primary T helper 17 cells PMA-I stimulated	--
13	chr9:117531600-117532600	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
14	chr9:117531600-117532600	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
15	chr9:117531600-117532600	Enhancers	Osteobl	bone
16	chr9:117531600-117532800	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links