Variant report

Variant rs13297080
Chromosome Location chr9:140330976-140330977
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:51 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:140318600-140335800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
2 chr9:140318800-140335600 Weak transcription Right Atrium heart
3 chr9:140325200-140335600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
4 chr9:140329000-140331800 Genic enhancers iPS DF 19.11 Cell Line embryonic stem cell
5 chr9:140329400-140332200 Enhancers Pancreas Pancrea
6 chr9:140329400-140332800 Enhancers Spleen Spleen
7 chr9:140329600-140332400 Enhancers Sigmoid Colon Sigmoid Colon
8 chr9:140329600-140332600 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
9 chr9:140329800-140331200 Enhancers K562 blood
10 chr9:140329800-140331800 Enhancers Rectal Mucosa Donor 29 rectum
11 chr9:140329800-140333200 Enhancers Breast Myoepithelial Primary Cells Breast
12 chr9:140330000-140331200 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
13 chr9:140330000-140331200 Enhancers Muscle Satellite Cultured Cells --
14 chr9:140330000-140331200 Enhancers HMEC breast
15 chr9:140330000-140331200 Enhancers NH-A brain
16 chr9:140330000-140332000 Enhancers A549 lung
17 chr9:140330000-140332800 Bivalent Enhancer Skeletal Muscle Female skeletal muscle
18 chr9:140330200-140331000 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
19 chr9:140330200-140331000 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
20 chr9:140330200-140331000 Bivalent Enhancer Foreskin Melanocyte Primary Cells skin01 Skin
21 chr9:140330200-140331000 Enhancers HSMM muscle
22 chr9:140330200-140331200 Enhancers Lung lung
23 chr9:140330200-140331200 Enhancers Ovary ovary
24 chr9:140330200-140331200 Enhancers HSMMtube muscle
25 chr9:140330200-140331200 Enhancers Osteobl bone
26 chr9:140330200-140331400 Flanking Active TSS Hela-S3 cervix
27 chr9:140330200-140335800 Weak transcription Primary hematopoietic stem cells blood
28 chr9:140330400-140331000 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
29 chr9:140330400-140331000 Bivalent Enhancer Foreskin Keratinocyte Primary Cells skin03 Skin
30 chr9:140330400-140331000 Bivalent Enhancer Stomach Smooth Muscle stomach
31 chr9:140330400-140331000 Bivalent Enhancer NHEK skin
32 chr9:140330400-140331200 Enhancers Fetal Intestine Large intestine
33 chr9:140330400-140332600 Enhancers Esophagus oesophagus
34 chr9:140330600-140331000 Weak transcription Fetal Intestine Small intestine
35 chr9:140330600-140331000 Enhancers Right Ventricle heart
36 chr9:140330600-140331400 Flanking Active TSS Colonic Mucosa Colon
37 chr9:140330600-140331600 Active TSS Rectal Smooth Muscle rectum
38 chr9:140330600-140335800 Weak transcription Primary hematopoietic stem cells short term culture blood
39 chr9:140330600-140335800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
40 chr9:140330800-140331000 Bivalent Enhancer Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
41 chr9:140330800-140331000 Flanking Bivalent TSS/Enh Foreskin Fibroblast Primary Cells skin02 Skin
42 chr9:140330800-140331000 Enhancers Psoas Muscle Psoas
43 chr9:140330800-140331000 Flanking Bivalent TSS/Enh Skeletal Muscle Male skeletal muscle
44 chr9:140330800-140331200 Flanking Active TSS Duodenum Mucosa Duodenum
45 chr9:140330800-140331200 Flanking Bivalent TSS/Enh HepG2 liver
46 chr9:140330800-140331400 Bivalent Enhancer Foreskin Fibroblast Primary Cells skin01 Skin
47 chr9:140330800-140331400 Flanking Active TSS Gastric stomach
48 chr9:140330800-140331800 Flanking Active TSS Stomach Mucosa stomach
49 chr9:140330800-140332800 Flanking Active TSS Rectal Mucosa Donor 31 rectum
50 chr9:140330800-140335600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --

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