Variant report

Variant rs13316105
Chromosome Location chr3:52080112-52080113
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:101 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:52074000-52083200 Weak transcription Pancreas Pancrea
2 chr3:52074400-52083200 Weak transcription Liver Liver
3 chr3:52075200-52080600 Weak transcription Gastric stomach
4 chr3:52075400-52080400 Weak transcription Stomach Mucosa stomach
5 chr3:52075800-52080400 Weak transcription Fetal Lung lung
6 chr3:52075800-52081000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
7 chr3:52076000-52081400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
8 chr3:52076000-52081600 Weak transcription Fetal Intestine Small intestine
9 chr3:52076000-52086400 Weak transcription Fetal Brain Male brain
10 chr3:52076600-52081600 Weak transcription Primary T helper naive cells from peripheral blood blood
11 chr3:52077200-52080800 Enhancers Brain Hippocampus Middle brain
12 chr3:52077200-52081800 Enhancers Brain Substantia Nigra brain
13 chr3:52077400-52081600 Enhancers Brain Inferior Temporal Lobe brain
14 chr3:52077400-52081800 Enhancers Skeletal Muscle Male skeletal muscle
15 chr3:52077400-52082400 Enhancers Brain Cingulate Gyrus brain
16 chr3:52077400-52082400 Enhancers Esophagus oesophagus
17 chr3:52077600-52080400 Bivalent Enhancer Fetal Muscle Trunk muscle
18 chr3:52077600-52081800 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
19 chr3:52077600-52083400 Enhancers Brain Angular Gyrus brain
20 chr3:52077800-52080800 Enhancers Breast Myoepithelial Primary Cells Breast
21 chr3:52077800-52082400 Weak transcription Fetal Intestine Large intestine
22 chr3:52077800-52082400 Enhancers Placenta Amnion Placenta Amnion
23 chr3:52077800-52083400 Weak transcription Primary B cells from cord blood blood
24 chr3:52078000-52081800 Weak transcription Primary hematopoietic stem cells short term culture blood
25 chr3:52078000-52083200 Weak transcription Rectal Mucosa Donor 31 rectum
26 chr3:52078000-52083400 Weak transcription Colon Smooth Muscle Colon
27 chr3:52078000-52084000 Weak transcription H9 Cell Line embryonic stem cell
28 chr3:52078200-52083800 Weak transcription Primary hematopoietic stem cells blood
29 chr3:52078200-52084200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
30 chr3:52078400-52080400 Enhancers HMEC breast
31 chr3:52078400-52081600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
32 chr3:52078400-52081800 Enhancers Right Ventricle heart
33 chr3:52078400-52082200 Weak transcription Rectal Smooth Muscle rectum
34 chr3:52078600-52080200 Weak transcription Stomach Smooth Muscle stomach
35 chr3:52078600-52081000 Enhancers NHLF lung
36 chr3:52078600-52081400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
37 chr3:52078600-52084200 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
38 chr3:52078800-52080200 Enhancers NHDF-Ad bronchial
39 chr3:52078800-52081600 Enhancers Placenta Placenta
40 chr3:52078800-52083200 Weak transcription Cortex derived primary cultured neurospheres brain
41 chr3:52078800-52083200 Weak transcription Duodenum Mucosa Duodenum
42 chr3:52079000-52081400 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
43 chr3:52079200-52080400 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
44 chr3:52079200-52080400 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
45 chr3:52079200-52081200 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
46 chr3:52079200-52081600 Enhancers HUES6 Cell Line embryonic stem cell
47 chr3:52079200-52081800 Enhancers Lung lung
48 chr3:52079200-52082000 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
49 chr3:52079200-52082000 Weak transcription Primary T cells from cord blood blood
50 chr3:52079200-52082200 Enhancers Primary T cells fromperipheralblood blood

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