The 2.0 version of rSNPBase

Variant report

Variant rs13329511
Chromosome Location chr15:41299121-41299122
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:124 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:41258800-41348400 Weak transcription ES-WA7 Cell Line embryonic stem cell
2 chr15:41267600-41301200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
3 chr15:41267800-41301400 Strong transcription Monocytes-CD14+_RO01746 blood
4 chr15:41268000-41302400 Strong transcription Primary monocytes fromperipheralblood blood
5 chr15:41276600-41354600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
6 chr15:41276800-41305200 Weak transcription Fetal Brain Male brain
7 chr15:41280200-41306600 Weak transcription Placenta Amnion Placenta Amnion
8 chr15:41280400-41339800 Weak transcription ES-I3 Cell Line embryonic stem cell
9 chr15:41284400-41301600 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
10 chr15:41287200-41301000 Strong transcription HUES64 Cell Line embryonic stem cell
11 chr15:41288200-41307400 Weak transcription iPS-15b Cell Line embryonic stem cell
12 chr15:41288200-41309800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
13 chr15:41289000-41300200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
14 chr15:41289000-41300600 Weak transcription H9 Cell Line embryonic stem cell
15 chr15:41289200-41306800 Weak transcription Primary T killer naive cells fromperipheralblood blood
16 chr15:41289400-41307000 Weak transcription Colonic Mucosa Colon
17 chr15:41289600-41299800 Weak transcription Brain Substantia Nigra brain
18 chr15:41289800-41307800 Weak transcription Rectal Smooth Muscle rectum
19 chr15:41289800-41310600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
20 chr15:41290000-41308200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
21 chr15:41290200-41310600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
22 chr15:41291600-41301200 Strong transcription Primary T helper cells PMA-I stimulated --
23 chr15:41292200-41299800 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
24 chr15:41293000-41300000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
25 chr15:41293800-41300800 Strong transcription iPS-20b Cell Line embryonic stem cell
26 chr15:41293800-41308400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
27 chr15:41294000-41303200 Weak transcription Stomach Mucosa stomach
28 chr15:41294000-41308200 Weak transcription Gastric stomach
29 chr15:41294000-41310600 Weak transcription Psoas Muscle Psoas
30 chr15:41294000-41313000 Weak transcription Esophagus oesophagus
31 chr15:41294000-41314600 Weak transcription Aorta Aorta
32 chr15:41294000-41316600 Weak transcription Pancreas Pancrea
33 chr15:41294200-41299800 Weak transcription NHLF lung
34 chr15:41294200-41306200 Weak transcription Fetal Kidney kidney
35 chr15:41294200-41316800 Weak transcription Pancreatic Islets Pancreatic Islet
36 chr15:41294800-41299800 Weak transcription Primary T helper naive cells fromperipheralblood blood
37 chr15:41294800-41303200 Weak transcription Small Intestine intestine
38 chr15:41295600-41299400 Strong transcription GM12878-XiMat blood
39 chr15:41295800-41300400 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
40 chr15:41295800-41302400 Strong transcription Fetal Muscle Leg muscle
41 chr15:41295800-41306000 Strong transcription Primary B cells from peripheral blood blood
42 chr15:41296000-41299200 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
43 chr15:41296000-41299200 Strong transcription Fetal Thymus thymus
44 chr15:41296000-41302000 Strong transcription Placenta Placenta
45 chr15:41296000-41302400 Strong transcription Primary hematopoietic stem cells short term culture blood
46 chr15:41296000-41310200 Strong transcription Breast Myoepithelial Primary Cells Breast
47 chr15:41296000-41315600 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
48 chr15:41296200-41300000 Strong transcription Hela-S3 cervix
49 chr15:41296400-41308200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
50 chr15:41296400-41308200 Weak transcription Right Ventricle heart

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Last update: Aug 31, 2015