Variant report
Variant | rs13331514 |
---|---|
Chromosome Location | chr16:10170609-10170610 |
allele | A/C |
Outlinks | Ensembl   UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No data |
No data |
No data |
No data |
No data |
No data |
No data |
rs_ID | r2[population] |
---|---|
rs10518149 | 1.00[CEU][hapmap];0.82[AMR][1000 genomes];0.97[EUR][1000 genomes] |
rs10518150 | 1.00[CEU][hapmap];0.97[EUR][1000 genomes] |
rs10518151 | 1.00[CEU][hapmap];1.00[GIH][hapmap];1.00[MEX][hapmap];0.82[TSI][hapmap];0.82[AMR][1000 genomes];0.97[EUR][1000 genomes] |
rs10518152 | 1.00[CEU][hapmap];0.97[EUR][1000 genomes] |
rs1070479 | 0.85[CEU][hapmap] |
rs1111537 | 0.91[CEU][hapmap];0.96[EUR][1000 genomes] |
rs11866570 | 1.00[MEX][hapmap] |
rs12102500 | 1.00[CEU][hapmap] |
rs12102636 | 1.00[CEU][hapmap] |
rs12102832 | 0.90[CEU][hapmap];0.96[YRI][hapmap];0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
rs13331030 | 1.00[CEU][hapmap];1.00[YRI][hapmap];0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
rs13331085 | 1.00[CEU][hapmap];1.00[YRI][hapmap];0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
rs13331088 | 1.00[CEU][hapmap];1.00[YRI][hapmap];0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
rs13331168 | 0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
rs13331428 | 1.00[CEU][hapmap];1.00[YRI][hapmap];0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
rs13331457 | 0.82[AMR][1000 genomes];0.93[EUR][1000 genomes] |
rs13331461 | 1.00[CEU][hapmap];0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
rs13331465 | 1.00[CEU][hapmap];1.00[YRI][hapmap];0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
rs13332018 | 0.97[EUR][1000 genomes] |
rs13332501 | 0.86[EUR][1000 genomes] |
rs13332665 | 1.00[CEU][hapmap];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes] |
rs13332699 | 1.00[CEU][hapmap];1.00[YRI][hapmap];0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
rs13336632 | 0.93[ASW][hapmap];1.00[CEU][hapmap];1.00[GIH][hapmap];0.83[LWK][hapmap];0.82[MEX][hapmap];0.94[MKK][hapmap];1.00[TSI][hapmap];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes] |
rs13336710 | 1.00[CEU][hapmap];0.96[YRI][hapmap];0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
rs1375068 | 0.88[CEU][hapmap] |
rs1375072 | 1.00[CEU][hapmap];1.00[GIH][hapmap];0.82[TSI][hapmap];0.97[EUR][1000 genomes] |
rs1375075 | 0.88[CEU][hapmap] |
rs1375076 | 0.96[EUR][1000 genomes] |
rs1448253 | 0.83[CEU][hapmap] |
rs1448261 | 0.82[AMR][1000 genomes];0.96[EUR][1000 genomes] |
rs1448262 | 1.00[CEU][hapmap];1.00[GIH][hapmap];1.00[MEX][hapmap];0.91[TSI][hapmap];0.82[AMR][1000 genomes];0.96[EUR][1000 genomes] |
rs1448268 | 0.91[CEU][hapmap];0.96[EUR][1000 genomes] |
rs1448270 | 1.00[CEU][hapmap];0.94[EUR][1000 genomes] |
rs1448271 | 0.96[EUR][1000 genomes] |
rs1448272 | 0.91[CEU][hapmap];0.96[EUR][1000 genomes] |
rs1463128 | 1.00[CEU][hapmap] |
rs16956843 | 0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
rs17569609 | 1.00[MEX][hapmap] |
rs17569693 | 1.00[MEX][hapmap] |
rs17569940 | 0.91[CEU][hapmap] |
rs17570290 | 1.00[CEU][hapmap];0.97[EUR][1000 genomes] |
rs17670396 | 1.00[MEX][hapmap] |
rs17670766 | 0.91[CEU][hapmap] |
rs17671033 | 1.00[CEU][hapmap];1.00[GIH][hapmap];1.00[MEX][hapmap];0.82[TSI][hapmap];0.94[EUR][1000 genomes] |
rs1827197 | 0.91[CEU][hapmap] |
rs2197778 | 0.82[MEX][hapmap] |
rs2352741 | 1.00[CEU][hapmap];0.99[EUR][1000 genomes] |
rs28375797 | 0.82[AMR][1000 genomes];0.97[EUR][1000 genomes] |
rs28465345 | 0.82[AMR][1000 genomes];0.96[EUR][1000 genomes] |
rs28491487 | 0.86[AMR][1000 genomes];0.92[EUR][1000 genomes] |
rs28528871 | 0.82[AMR][1000 genomes];0.89[EUR][1000 genomes] |
rs28540790 | 0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
rs28574279 | 0.82[AMR][1000 genomes];0.97[EUR][1000 genomes] |
rs28581562 | 0.82[AMR][1000 genomes];0.94[EUR][1000 genomes] |
rs28634372 | 0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes] |
rs4107019 | 0.91[CEU][hapmap];1.00[MEX][hapmap] |
rs4780784 | 0.91[CEU][hapmap];1.00[GIH][hapmap];0.82[TSI][hapmap];0.96[EUR][1000 genomes] |
rs4782266 | 0.83[CEU][hapmap] |
rs4998386 | 1.00[MEX][hapmap] |
rs56666352 | 0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
rs57587803 | 0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
rs57737700 | 0.97[EUR][1000 genomes] |
rs58797003 | 0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
rs58861142 | 0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
rs59568026 | 0.89[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
rs60276136 | 0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
rs60864732 | 0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
rs60950183 | 0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
rs61224814 | 0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
rs61686802 | 0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
rs6497716 | 0.90[CEU][hapmap] |
rs67171153 | 0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
rs67679267 | 0.82[AMR][1000 genomes];0.89[EUR][1000 genomes] |
rs67780046 | 0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
rs67828712 | 0.95[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes] |
rs7188081 | 0.82[AMR][1000 genomes];0.96[EUR][1000 genomes] |
rs7188291 | 1.00[CEU][hapmap];1.00[GIH][hapmap];1.00[MEX][hapmap];0.91[TSI][hapmap];0.82[AMR][1000 genomes];0.96[EUR][1000 genomes] |
rs7189360 | 1.00[CEU][hapmap] |
rs7190321 | 1.00[CEU][hapmap];0.82[AMR][1000 genomes];0.90[EUR][1000 genomes] |
rs7190619 | 0.81[CEU][hapmap];1.00[MEX][hapmap] |
rs7190716 | 1.00[MEX][hapmap] |
rs7192622 | 1.00[CEU][hapmap] |
rs7193123 | 1.00[CEU][hapmap] |
rs7196139 | 0.83[CEU][hapmap];0.80[EUR][1000 genomes] |
rs7197200 | 1.00[CEU][hapmap];1.00[GIH][hapmap];0.87[LWK][hapmap];1.00[MEX][hapmap];0.88[MKK][hapmap];1.00[TSI][hapmap] |
rs7198528 | 0.88[CEU][hapmap] |
rs7200039 | 1.00[CEU][hapmap] |
rs7200649 | 1.00[CEU][hapmap] |
rs7200719 | 0.91[CEU][hapmap];1.00[MEX][hapmap] |
rs7201627 | 0.91[CEU][hapmap];0.84[EUR][1000 genomes] |
rs7203194 | 1.00[CEU][hapmap];1.00[GIH][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap] |
rs7206094 | 0.88[EUR][1000 genomes] |
rs7206296 | 0.88[CEU][hapmap] |
rs72772374 | 0.89[EUR][1000 genomes] |
rs72772397 | 0.92[EUR][1000 genomes] |
rs72774106 | 0.97[EUR][1000 genomes] |
rs72774110 | 0.82[AMR][1000 genomes];0.96[EUR][1000 genomes] |
rs72774111 | 0.82[AMR][1000 genomes];0.96[EUR][1000 genomes] |
rs72774115 | 0.97[EUR][1000 genomes] |
rs72774116 | 0.82[AMR][1000 genomes];0.97[EUR][1000 genomes] |
rs72774119 | 0.82[AMR][1000 genomes];0.97[EUR][1000 genomes] |
rs72774121 | 0.97[EUR][1000 genomes] |
rs72774122 | 0.97[EUR][1000 genomes] |
rs72774125 | 0.82[AMR][1000 genomes];0.97[EUR][1000 genomes] |
rs72774126 | 0.82[AMR][1000 genomes];0.97[EUR][1000 genomes] |
rs72774127 | 0.82[AMR][1000 genomes];0.97[EUR][1000 genomes] |
rs72774129 | 0.97[EUR][1000 genomes] |
rs72774131 | 0.82[AMR][1000 genomes];0.97[EUR][1000 genomes] |
rs72774134 | 0.82[AMR][1000 genomes];0.97[EUR][1000 genomes] |
rs72774136 | 0.82[AMR][1000 genomes];0.97[EUR][1000 genomes] |
rs72774137 | 0.82[AMR][1000 genomes];0.97[EUR][1000 genomes] |
rs72774138 | 0.82[AMR][1000 genomes];0.97[EUR][1000 genomes] |
rs72774139 | 0.82[AMR][1000 genomes];0.97[EUR][1000 genomes] |
rs72774141 | 0.97[EUR][1000 genomes] |
rs72774143 | 0.97[EUR][1000 genomes] |
rs72774148 | 0.97[EUR][1000 genomes] |
rs72774150 | 0.82[AMR][1000 genomes];0.97[EUR][1000 genomes] |
rs72774156 | 0.97[EUR][1000 genomes] |
rs72774158 | 0.97[EUR][1000 genomes] |
rs72774159 | 0.97[EUR][1000 genomes] |
rs72774171 | 0.96[EUR][1000 genomes] |
rs72776031 | 0.80[EUR][1000 genomes] |
rs72776036 | 0.80[EUR][1000 genomes] |
rs73510663 | 0.97[EUR][1000 genomes] |
rs8043728 | 0.91[CEU][hapmap];1.00[GIH][hapmap];1.00[MEX][hapmap] |
rs8045558 | 1.00[MEX][hapmap] |
rs8056514 | 1.00[CEU][hapmap] |
rs8056683 | 1.00[CEU][hapmap];0.93[AMR][1000 genomes];0.92[EUR][1000 genomes] |
rs8057034 | 0.82[AMR][1000 genomes];0.97[EUR][1000 genomes] |
rs8059513 | 0.82[AMR][1000 genomes];0.96[EUR][1000 genomes] |
rs8059547 | 1.00[CEU][hapmap];0.81[YRI][hapmap];0.85[AFR][1000 genomes];0.96[AMR][1000 genomes];0.99[EUR][1000 genomes] |
rs8060239 | 1.00[GIH][hapmap] |
rs8061018 | 0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
rs8061963 | 0.88[EUR][1000 genomes] |
rs8062241 | 0.81[CEU][hapmap];1.00[YRI][hapmap];0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
rs8062320 | 1.00[CEU][hapmap];0.89[EUR][1000 genomes] |
rs8062624 | 1.00[CEU][hapmap];0.87[YRI][hapmap];0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes] |
rs9302409 | 1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[GIH][hapmap];0.87[LWK][hapmap];1.00[MEX][hapmap];0.85[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
rs9922338 | 0.82[AMR][1000 genomes];0.97[EUR][1000 genomes] |
rs9922383 | 1.00[CEU][hapmap];1.00[GIH][hapmap];1.00[MEX][hapmap];0.91[TSI][hapmap] |
rs9922871 | 1.00[CEU][hapmap];1.00[GIH][hapmap];1.00[MEX][hapmap];0.82[TSI][hapmap];0.82[AMR][1000 genomes];0.97[EUR][1000 genomes] |
rs9925439 | 1.00[MEX][hapmap] |
rs9925707 | 1.00[CEU][hapmap] |
rs9927648 | 0.91[CEU][hapmap];0.82[AMR][1000 genomes];0.97[EUR][1000 genomes] |
rs9927914 | 1.00[CEU][hapmap] |
rs9927926 | 1.00[CEU][hapmap] |
rs9930321 | 0.82[AMR][1000 genomes];0.96[EUR][1000 genomes] |
rs9930364 | 0.83[CEU][hapmap];1.00[MEX][hapmap] |
rs9930396 | 0.82[AMR][1000 genomes];0.96[EUR][1000 genomes] |
rs9931653 | 0.82[AMR][1000 genomes];0.97[EUR][1000 genomes] |
rs9933111 | 1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[GIH][hapmap];0.90[LWK][hapmap];1.00[MEX][hapmap];0.96[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
rs9933478 | 0.82[AMR][1000 genomes];0.94[EUR][1000 genomes] |
rs9933945 | 1.00[CEU][hapmap];1.00[YRI][hapmap];0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
rs9935774 | 1.00[CEU][hapmap] |
rs9936854 | 0.82[AMR][1000 genomes];0.97[EUR][1000 genomes] |
rs9937970 | 1.00[CEU][hapmap] |
rs9938467 | 1.00[CEU][hapmap];1.00[YRI][hapmap];0.95[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes] |
rs9938777 | 1.00[CEU][hapmap];0.82[AMR][1000 genomes];0.97[EUR][1000 genomes] |
rs9940458 | 0.96[AMR][1000 genomes];1.00[EUR][1000 genomes] |
Variant overlapped rSNPs/rCNVs (count:24 , 50 per page) page:
1
No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | nsv949196 | chr16:9937980-10182349 | Enhancers Weak transcription Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent Enhancer Strong transcription Genic enhancers Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3' | TF binding regionCpG islandChromatin interactive regionlncRNA | 2 gene(s) | inside rSNPs | diseases |
2 | nsv1037001 | chr16:10008023-10476482 | Enhancers Bivalent Enhancer Weak transcription ZNF genes & repeats Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Strong transcription Transcr. at gene 5' and 3' Genic enhancers | TF binding regionCpG islandChromatin interactive regionlncRNA | 6 gene(s) | inside rSNPs | diseases |
3 | esv2422500 | chr16:10008309-10415517 | Bivalent Enhancer Enhancers Weak transcription Flanking Active TSS Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Active TSS Genic enhancers Strong transcription Transcr. at gene 5' and 3' | TF binding regionCpG islandChromatin interactive regionlncRNA | 5 gene(s) | inside rSNPs | diseases |
4 | nsv1052566 | chr16:10033178-10260068 | Enhancers Transcr. at gene 5' and 3' Weak transcription Active TSS Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Genic enhancers ZNF genes & repeats | TF binding regionCpG islandChromatin interactive regionlncRNA | 3 gene(s) | inside rSNPs | diseases |
5 | esv2758410 | chr16:10060976-10257550 | Flanking Active TSS Weak transcription Enhancers Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats Genic enhancers | TF binding regionCpG islandChromatin interactive regionlncRNA | 3 gene(s) | inside rSNPs | diseases |
6 | esv2758629 | chr16:10060976-10257550 | Weak transcription Active TSS Enhancers Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' | TF binding regionCpG islandChromatin interactive regionlncRNA | 3 gene(s) | inside rSNPs | diseases |
7 | nsv427973 | chr16:10060976-10257550 | Enhancers Weak transcription Active TSS Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3' Genic enhancers | TF binding regionCpG islandChromatin interactive regionlncRNA | 3 gene(s) | inside rSNPs | diseases |
8 | nsv1037707 | chr16:10078790-10529893 | Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer Enhancers Weak transcription Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Strong transcription Genic enhancers Transcr. at gene 5' and 3' | TF binding regionCpG islandChromatin interactive regionlncRNA | 10 gene(s) | inside rSNPs | diseases |
9 | nsv1042727 | chr16:10092002-10521096 | Enhancers Active TSS Bivalent Enhancer Flanking Active TSS Weak transcription ZNF genes & repeats Genic enhancers Strong transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' | TF binding regionCpG islandChromatin interactive regionlncRNA | 10 gene(s) | inside rSNPs | diseases |
10 | nsv932624 | chr16:10092048-10520294 | Enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Weak transcription Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS ZNF genes & repeats Bivalent/Poised TSS Strong transcription Genic enhancers | TF binding regionCpG islandChromatin interactive regionlncRNA | 10 gene(s) | inside rSNPs | diseases |
11 | nsv1045651 | chr16:10106137-10520295 | Bivalent/Poised TSS Enhancers Bivalent Enhancer ZNF genes & repeats Active TSS Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' Strong transcription Flanking Bivalent TSS/Enh Genic enhancers | TF binding regionCpG islandChromatin interactive regionlncRNA | 10 gene(s) | inside rSNPs | diseases |
12 | nsv542742 | chr16:10106137-10520295 | Active TSS Weak transcription Flanking Bivalent TSS/Enh Enhancers Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Strong transcription Bivalent/Poised TSS Transcr. at gene 5' and 3' Genic enhancers | TF binding regionCpG islandChromatin interactive regionlncRNA | 10 gene(s) | inside rSNPs | diseases |
13 | nsv1053991 | chr16:10106137-10532500 | Weak transcription Active TSS Flanking Bivalent TSS/Enh Enhancers ZNF genes & repeats Flanking Active TSS Strong transcription Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3' Genic enhancers | TF binding regionCpG islandChromatin interactive regionlncRNA | 10 gene(s) | inside rSNPs | diseases |
14 | nsv542743 | chr16:10106137-10532500 | Bivalent/Poised TSS Enhancers Weak transcription Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Genic enhancers Bivalent Enhancer Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3' | TF binding regionCpG islandChromatin interactive regionlncRNA | 10 gene(s) | inside rSNPs | diseases |
15 | nsv533421 | chr16:10106138-10520294 | Weak transcription Bivalent/Poised TSS ZNF genes & repeats Enhancers Active TSS Strong transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3' | TF binding regionCpG islandChromatin interactive regionlncRNA | 10 gene(s) | inside rSNPs | diseases |
16 | nsv1036532 | chr16:10107173-10520100 | Enhancers Weak transcription ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS Strong transcription Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' | TF binding regionCpG islandChromatin interactive regionlncRNA | 10 gene(s) | inside rSNPs | diseases |
17 | nsv542744 | chr16:10107173-10520100 | Transcr. at gene 5' and 3' Enhancers Bivalent Enhancer Flanking Active TSS Weak transcription ZNF genes & repeats Strong transcription Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Genic enhancers | TF binding regionCpG islandChromatin interactive regionlncRNA | 10 gene(s) | inside rSNPs | diseases |
18 | nsv1050509 | chr16:10107173-10564913 | Active TSS Enhancers Weak transcription ZNF genes & repeats Strong transcription Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3' | TF binding regionCpG islandChromatin interactive regionlncRNA | 12 gene(s) | inside rSNPs | diseases |
19 | nsv542745 | chr16:10107173-10564913 | Strong transcription Weak transcription Enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Flanking Active TSS Active TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' | TF binding regionCpG islandChromatin interactive regionlncRNA | 12 gene(s) | inside rSNPs | diseases |
20 | nsv571443 | chr16:10112199-10184183 | Weak transcription Active TSS Bivalent Enhancer Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats Genic enhancers | TF binding regionCpG islandChromatin interactive regionlncRNA | 2 gene(s) | inside rSNPs | diseases |
21 | nsv905334 | chr16:10128523-10187716 | Flanking Active TSS Weak transcription Enhancers Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS Genic enhancers | TF binding regionCpG islandChromatin interactive regionlncRNA | 1 gene(s) | inside rSNPs | diseases |
22 | nsv1043654 | chr16:10133882-10227108 | Enhancers Flanking Active TSS Weak transcription Bivalent Enhancer Active TSS Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats | TF binding regionCpG islandChromatin interactive regionlncRNA | 1 gene(s) | inside rSNPs | diseases |
23 | nsv1042657 | chr16:10139047-10338293 | Bivalent/Poised TSS Enhancers Bivalent Enhancer Weak transcription Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS ZNF genes & repeats | TF binding regionCpG islandChromatin interactive regionlncRNA | 3 gene(s) | inside rSNPs | diseases |
24 | nsv833138 | chr16:10165143-10312048 | Flanking Active TSS Active TSS Enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS Weak transcription ZNF genes & repeats | TF binding regionCpG islandChromatin interactive regionlncRNA | 2 gene(s) | inside rSNPs | diseases |
No data |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr16:10163600-10173600 | Weak transcription | Right Atrium | heart |
2 | chr16:10169200-10172800 | Weak transcription | H1 BMP4 Derived Mesendoderm Cultured Cells | ES cell derived |
3 | chr16:10169200-10173200 | Weak transcription | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
4 | chr16:10170000-10172200 | Weak transcription | HUES6 Cell Line | embryonic stem cell |
5 | chr16:10170200-10172000 | Weak transcription | iPS DF 19.11 Cell Line | embryonic stem cell |
6 | chr16:10170400-10171800 | Weak transcription | ES-I3 Cell Line | embryonic stem cell |
7 | chr16:10170400-10171800 | Weak transcription | H9 Cell Line | embryonic stem cell |
8 | chr16:10170400-10172000 | Weak transcription | iPS-15b Cell Line | embryonic stem cell |
9 | chr16:10170400-10172200 | Weak transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
10 | chr16:10170600-10172000 | Weak transcription | ES-WA7 Cell Line | embryonic stem cell |
11 | chr16:10170600-10172200 | Weak transcription | Stomach Mucosa | stomach |