Variant report

Variant rs13340008
Chromosome Location chr21:46730056-46730057
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:54 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr21:46713800-46738800 Weak transcription Gastric stomach
2 chr21:46722800-46730200 Enhancers Fetal Muscle Leg muscle
3 chr21:46723000-46730800 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
4 chr21:46724200-46730200 Enhancers Pancreas Pancrea
5 chr21:46725000-46730200 Enhancers Fetal Lung lung
6 chr21:46725800-46730800 Enhancers Fetal Adrenal Gland Adrenal Gland
7 chr21:46725800-46730800 Enhancers Ovary ovary
8 chr21:46726200-46730200 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
9 chr21:46726200-46730200 Enhancers Brain Dorsolateral Prefrontal Cortex brain
10 chr21:46726200-46730200 Enhancers Brain Substantia Nigra brain
11 chr21:46726200-46730200 Bivalent Enhancer Placenta Placenta
12 chr21:46726200-46731400 Enhancers Fetal Intestine Small intestine
13 chr21:46726400-46730200 Enhancers Liver Liver
14 chr21:46726400-46730200 Enhancers Left Ventricle heart
15 chr21:46726400-46730200 Enhancers Right Atrium heart
16 chr21:46726400-46730400 Enhancers Right Ventricle heart
17 chr21:46726800-46730800 Enhancers HSMMtube muscle
18 chr21:46727000-46730800 Enhancers Brain Anterior Caudate brain
19 chr21:46727200-46730200 Enhancers Brain Hippocampus Middle brain
20 chr21:46727200-46730200 Enhancers Duodenum Smooth Muscle Duodenum
21 chr21:46727200-46730800 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
22 chr21:46727200-46730800 Enhancers Spleen Spleen
23 chr21:46727400-46730200 Enhancers Brain Cingulate Gyrus brain
24 chr21:46727400-46730200 Enhancers Brain Inferior Temporal Lobe brain
25 chr21:46727600-46737200 Weak transcription Aorta Aorta
26 chr21:46727800-46730200 Enhancers Rectal Smooth Muscle rectum
27 chr21:46727800-46730800 Enhancers Stomach Smooth Muscle stomach
28 chr21:46728000-46730200 Bivalent Enhancer Foreskin Fibroblast Primary Cells skin01 Skin
29 chr21:46728400-46730200 Bivalent Enhancer Skeletal Muscle Female skeletal muscle
30 chr21:46728400-46730800 Enhancers HUVEC blood vessel
31 chr21:46728400-46731400 Enhancers Fetal Intestine Large intestine
32 chr21:46728800-46730600 Enhancers Adipose Nuclei Adipose
33 chr21:46729000-46730600 Enhancers HSMM muscle
34 chr21:46729000-46730800 Enhancers Duodenum Mucosa Duodenum
35 chr21:46729400-46730200 Enhancers HepG2 liver
36 chr21:46729400-46730400 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
37 chr21:46729400-46730800 Bivalent Enhancer Skeletal Muscle Male skeletal muscle
38 chr21:46729400-46733400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
39 chr21:46729600-46730200 Enhancers Muscle Satellite Cultured Cells --
40 chr21:46729600-46730600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
41 chr21:46729600-46730800 Enhancers Lung lung
42 chr21:46729600-46733400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
43 chr21:46729800-46730200 Enhancers Esophagus oesophagus
44 chr21:46729800-46730200 Enhancers Fetal Stomach stomach
45 chr21:46729800-46730400 ZNF genes & repeats H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
46 chr21:46729800-46737400 Weak transcription HUES6 Cell Line embryonic stem cell
47 chr21:46730000-46730200 ZNF genes & repeats H9 Cell Line embryonic stem cell
48 chr21:46730000-46730200 Enhancers iPS DF 6.9 Cell Line embryonic stem cell
49 chr21:46730000-46730200 Bivalent/Poised TSS Foreskin Fibroblast Primary Cells skin02 Skin
50 chr21:46730000-46730200 ZNF genes & repeats Fetal Kidney kidney

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