Variant report

Variant rs9977389
Chromosome Location chr21:46716805-46716806
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:74 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr21:46711400-46719200 Weak transcription NHEK skin
2 chr21:46712200-46717000 Enhancers NHDF-Ad bronchial
3 chr21:46713400-46717000 Weak transcription A549 lung
4 chr21:46713400-46717400 Weak transcription Liver Liver
5 chr21:46713400-46720400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
6 chr21:46713600-46720400 Weak transcription Breast Myoepithelial Primary Cells Breast
7 chr21:46713600-46720400 Weak transcription Primary T killer memory cells from peripheral blood blood
8 chr21:46713600-46721000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
9 chr21:46713600-46721800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
10 chr21:46713600-46722600 Weak transcription Primary T cells from cord blood blood
11 chr21:46713800-46738800 Weak transcription Gastric stomach
12 chr21:46714800-46720400 Weak transcription Primary T helper cells PMA-I stimulated --
13 chr21:46715000-46722000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
14 chr21:46715200-46717000 Enhancers Fetal Adrenal Gland Adrenal Gland
15 chr21:46715200-46718600 Weak transcription Primary T helper naive cells fromperipheralblood blood
16 chr21:46715200-46720200 Weak transcription ES-WA7 Cell Line embryonic stem cell
17 chr21:46715200-46722000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
18 chr21:46715200-46726400 Weak transcription Brain Germinal Matrix brain
19 chr21:46715400-46717000 Enhancers HSMMtube muscle
20 chr21:46715400-46717400 Weak transcription HepG2 liver
21 chr21:46715400-46726200 Weak transcription Brain Hippocampus Middle brain
22 chr21:46715600-46719400 Weak transcription Rectal Mucosa Donor 29 rectum
23 chr21:46715600-46719400 Weak transcription Right Ventricle heart
24 chr21:46715600-46720000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
25 chr21:46715600-46720000 Weak transcription Colonic Mucosa Colon
26 chr21:46715600-46720800 Weak transcription Sigmoid Colon Sigmoid Colon
27 chr21:46715600-46722000 Weak transcription Brain Inferior Temporal Lobe brain
28 chr21:46715600-46726200 Weak transcription Brain Cingulate Gyrus brain
29 chr21:46715600-46730000 Weak transcription H9 Cell Line embryonic stem cell
30 chr21:46715800-46718600 Weak transcription K562 blood
31 chr21:46715800-46719400 Weak transcription Brain Substantia Nigra brain
32 chr21:46715800-46719400 Weak transcription Left Ventricle heart
33 chr21:46715800-46719600 Weak transcription Adipose Nuclei Adipose
34 chr21:46715800-46719800 Weak transcription Small Intestine intestine
35 chr21:46715800-46720200 Weak transcription Stomach Smooth Muscle stomach
36 chr21:46715800-46721000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
37 chr21:46715800-46721200 Weak transcription Spleen Spleen
38 chr21:46715800-46721400 Weak transcription Duodenum Smooth Muscle Duodenum
39 chr21:46715800-46721600 Weak transcription Duodenum Mucosa Duodenum
40 chr21:46715800-46724200 Weak transcription Pancreas Pancrea
41 chr21:46715800-46726000 Weak transcription Brain Anterior Caudate brain
42 chr21:46715800-46730000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
43 chr21:46716000-46718600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
44 chr21:46716000-46719200 Weak transcription Fetal Stomach stomach
45 chr21:46716000-46721400 Weak transcription HUVEC blood vessel
46 chr21:46716000-46722000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
47 chr21:46716200-46717800 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
48 chr21:46716200-46719200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
49 chr21:46716200-46719400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
50 chr21:46716200-46719400 Weak transcription Fetal Muscle Trunk muscle

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