The 2.0 version of rSNPBase

Variant report

Variant rs13346881
Chromosome Location chr19:41943464-41943465
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:124 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:41934000-41944800 Weak transcription Hela-S3 cervix
2 chr19:41934400-41945000 Weak transcription Pancreatic Islets Pancreatic Islet
3 chr19:41934600-41944200 Weak transcription Fetal Brain Male brain
4 chr19:41934800-41945400 Weak transcription Small Intestine intestine
5 chr19:41935000-41945000 Weak transcription ES-I3 Cell Line embryonic stem cell
6 chr19:41936600-41944200 Strong transcription A549 lung
7 chr19:41936800-41944200 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
8 chr19:41936800-41944200 Strong transcription Breast Myoepithelial Primary Cells Breast
9 chr19:41936800-41944200 Strong transcription Primary T cells from cord blood blood
10 chr19:41937000-41944200 Strong transcription Primary T helper naive cells fromperipheralblood blood
11 chr19:41937200-41944200 Strong transcription HUES64 Cell Line embryonic stem cell
12 chr19:41938400-41943800 Weak transcription Primary T helper naive cells from peripheral blood blood
13 chr19:41938600-41945000 Weak transcription HSMMtube muscle
14 chr19:41938800-41944800 Weak transcription iPS-15b Cell Line embryonic stem cell
15 chr19:41938800-41945000 Weak transcription Fetal Kidney kidney
16 chr19:41938800-41945000 Weak transcription NHDF-Ad bronchial
17 chr19:41938800-41945200 Weak transcription Right Atrium heart
18 chr19:41939000-41944800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
19 chr19:41939000-41944800 Weak transcription NH-A brain
20 chr19:41939000-41945000 Weak transcription Primary B cells from cord blood blood
21 chr19:41939200-41944600 Weak transcription Muscle Satellite Cultured Cells --
22 chr19:41939200-41944600 Weak transcription GM12878-XiMat blood
23 chr19:41939200-41944800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
24 chr19:41939200-41944800 Weak transcription Fetal Lung lung
25 chr19:41939200-41944800 Weak transcription HSMM muscle
26 chr19:41939200-41945000 Weak transcription Primary T killer naive cells fromperipheralblood blood
27 chr19:41939200-41945000 Weak transcription Brain Inferior Temporal Lobe brain
28 chr19:41939400-41943600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
29 chr19:41939400-41943600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
30 chr19:41939400-41943600 Weak transcription Duodenum Smooth Muscle Duodenum
31 chr19:41939400-41943800 Weak transcription Primary neutrophils fromperipheralblood blood
32 chr19:41939400-41943800 Weak transcription Esophagus oesophagus
33 chr19:41939400-41944600 Weak transcription Primary T helper cells PMA-I stimulated --
34 chr19:41939400-41944600 Weak transcription HUVEC blood vessel
35 chr19:41939400-41944800 Weak transcription iPS-18 Cell Line embryonic stem cell
36 chr19:41939400-41944800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
37 chr19:41939400-41944800 Weak transcription Liver Liver
38 chr19:41939400-41944800 Weak transcription HMEC breast
39 chr19:41939400-41945000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
40 chr19:41939400-41945000 Weak transcription Stomach Mucosa stomach
41 chr19:41939400-41945200 Weak transcription Colonic Mucosa Colon
42 chr19:41939600-41943600 Weak transcription H9 Cell Line embryonic stem cell
43 chr19:41939600-41943600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
44 chr19:41939600-41943800 Weak transcription Pancreas Pancrea
45 chr19:41939600-41943800 Weak transcription NHLF lung
46 chr19:41939600-41944800 Weak transcription H1 Cell Line embryonic stem cell
47 chr19:41939600-41944800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
48 chr19:41939600-41944800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
49 chr19:41939600-41944800 Weak transcription Primary T killer memory cells from peripheral blood blood
50 chr19:41939600-41944800 Weak transcription Fetal Thymus thymus

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Last update: Aug 31, 2015