Variant report
Variant | rs13356242 |
---|---|
Chromosome Location | chr5:112388265-112388266 |
allele | A/G |
Outlinks | Ensembl   UCSC |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr5:112363800-112399000 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
2 | chr5:112363800-112409200 | Weak transcription | Colonic Mucosa | Colon |
3 | chr5:112363800-112417800 | Weak transcription | Duodenum Mucosa | Duodenum |
4 | chr5:112364000-112389400 | Weak transcription | Brain Cingulate Gyrus | brain |
5 | chr5:112370200-112406600 | Weak transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
6 | chr5:112370600-112396600 | Strong transcription | Foreskin Melanocyte Primary Cells skin03 | Skin |
7 | chr5:112371400-112391400 | Strong transcription | Foreskin Melanocyte Primary Cells skin01 | Skin |
8 | chr5:112371400-112423800 | Weak transcription | H1 BMP4 Derived Mesendoderm Cultured Cells | ES cell derived |
9 | chr5:112371600-112394200 | Strong transcription | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
10 | chr5:112372800-112396800 | Weak transcription | H9 Cell Line | embryonic stem cell |
11 | chr5:112373000-112398800 | Weak transcription | HUES48 Cell Line | embryonic stem cell |
12 | chr5:112373200-112399000 | Weak transcription | H1 Cell Line | embryonic stem cell |
13 | chr5:112375000-112402600 | Weak transcription | Pancreas | Pancrea |
14 | chr5:112377400-112389000 | Weak transcription | Primary T cells from cord blood | blood |
15 | chr5:112379600-112388800 | Weak transcription | Gastric | stomach |
16 | chr5:112379600-112388800 | Weak transcription | Spleen | Spleen |
17 | chr5:112379600-112399600 | Weak transcription | iPS DF 19.11 Cell Line | embryonic stem cell |
18 | chr5:112379600-112424200 | Weak transcription | Psoas Muscle | Psoas |
19 | chr5:112379800-112388800 | Weak transcription | Brain Substantia Nigra | brain |
20 | chr5:112383200-112409400 | Strong transcription | Liver | Liver |
21 | chr5:112383400-112395200 | Weak transcription | iPS-15b Cell Line | embryonic stem cell |
22 | chr5:112383600-112392000 | Strong transcription | Ganglion Eminence derived primary cultured neurospheres | brain |
23 | chr5:112383600-112394200 | Weak transcription | Brain Hippocampus Middle | brain |
24 | chr5:112383800-112389200 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
25 | chr5:112383800-112393000 | Weak transcription | Brain Germinal Matrix | brain |
26 | chr5:112383800-112394000 | Weak transcription | Fetal Thymus | thymus |
27 | chr5:112384000-112388400 | Weak transcription | ES-I3 Cell Line | embryonic stem cell |
28 | chr5:112384000-112389800 | Enhancers | K562 | blood |
29 | chr5:112384000-112393200 | Strong transcription | Cortex derived primary cultured neurospheres | brain |
30 | chr5:112384000-112453000 | Weak transcription | Rectal Mucosa Donor 29 | rectum |
31 | chr5:112384200-112388400 | Weak transcription | Fetal Intestine Small | intestine |
32 | chr5:112384200-112390200 | Weak transcription | Fetal Intestine Large | intestine |
33 | chr5:112384200-112392600 | Weak transcription | Fetal Kidney | kidney |
34 | chr5:112384200-112393000 | Weak transcription | Fetal Brain Male | brain |
35 | chr5:112384200-112411000 | Weak transcription | Pancreatic Islets | Pancreatic Islet |
36 | chr5:112384600-112398400 | Weak transcription | iPS-18 Cell Line | embryonic stem cell |
37 | chr5:112384600-112398800 | Weak transcription | HUES64 Cell Line | embryonic stem cell |
38 | chr5:112384800-112399000 | Weak transcription | Aorta | Aorta |
39 | chr5:112385000-112389200 | Weak transcription | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
40 | chr5:112385000-112390400 | Weak transcription | Lung | lung |
41 | chr5:112385600-112388800 | Weak transcription | Fetal Lung | lung |
42 | chr5:112385800-112388600 | Enhancers | HMEC | breast |
43 | chr5:112385800-112389000 | Enhancers | Right Atrium | heart |
44 | chr5:112386000-112388600 | Enhancers | NHDF-Ad | bronchial |
45 | chr5:112386000-112388800 | Enhancers | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
46 | chr5:112386000-112389000 | Weak transcription | H9 Derived Neuron Cultured Cells | ES cell derived |
47 | chr5:112386000-112397200 | Weak transcription | Fetal Heart | heart |
48 | chr5:112386200-112388600 | Enhancers | Muscle Satellite Cultured Cells | -- |
49 | chr5:112386200-112388600 | Enhancers | Foreskin Fibroblast Primary Cells skin01 | Skin |
50 | chr5:112386200-112388600 | Enhancers | HSMM | muscle |