Variant report

Variant rs1337058
Chromosome Location chr1:162116180-162116181
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:55 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:162107200-162124200 Weak transcription Aorta Aorta
2 chr1:162111200-162119600 Enhancers Breast Myoepithelial Primary Cells Breast
3 chr1:162111400-162116400 Enhancers ES-WA7 Cell Line embryonic stem cell
4 chr1:162111400-162117800 Weak transcription Pancreas Pancrea
5 chr1:162112600-162118200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
6 chr1:162112600-162121800 Weak transcription Primary hematopoietic stem cells short term culture blood
7 chr1:162112800-162119200 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
8 chr1:162113400-162119200 Enhancers ES-UCSF4 Cell Line embryonic stem cell
9 chr1:162113600-162116600 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
10 chr1:162113800-162116400 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
11 chr1:162114000-162116200 Enhancers Liver Liver
12 chr1:162114200-162116200 Enhancers Brain Angular Gyrus brain
13 chr1:162114200-162116400 Enhancers H9 Cell Line embryonic stem cell
14 chr1:162114200-162116400 Flanking Active TSS H9 Derived Neuron Cultured Cells ES cell derived
15 chr1:162114400-162116400 Enhancers Fetal Brain Male brain
16 chr1:162114400-162116600 Enhancers iPS DF 6.9 Cell Line embryonic stem cell
17 chr1:162114400-162116600 Enhancers Fetal Adrenal Gland Adrenal Gland
18 chr1:162114400-162117000 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
19 chr1:162114600-162116200 Enhancers Fetal Brain Female brain
20 chr1:162114600-162116200 Enhancers Fetal Kidney kidney
21 chr1:162114600-162116400 Enhancers Brain Dorsolateral Prefrontal Cortex brain
22 chr1:162114600-162116600 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
23 chr1:162114800-162116400 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
24 chr1:162114800-162116400 Enhancers Fetal Stomach stomach
25 chr1:162114800-162116400 Enhancers NH-A brain
26 chr1:162115000-162116200 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
27 chr1:162115200-162116200 Flanking Active TSS HUES48 Cell Line embryonic stem cell
28 chr1:162115200-162116400 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
29 chr1:162115200-162116400 Flanking Active TSS iPS-20b Cell Line embryonic stem cell
30 chr1:162115200-162116400 Enhancers Fetal Lung lung
31 chr1:162115200-162116400 Enhancers Fetal Muscle Leg muscle
32 chr1:162115200-162116400 Enhancers Placenta Placenta
33 chr1:162115400-162116200 Enhancers Colon Smooth Muscle Colon
34 chr1:162115600-162116200 Enhancers Hela-S3 cervix
35 chr1:162115600-162116400 Enhancers Brain Hippocampus Middle brain
36 chr1:162115600-162116400 Enhancers Brain Substantia Nigra brain
37 chr1:162115600-162116400 Enhancers Rectal Smooth Muscle rectum
38 chr1:162115600-162116400 Enhancers Stomach Smooth Muscle stomach
39 chr1:162115600-162118200 Enhancers H1 Cell Line embryonic stem cell
40 chr1:162115600-162119200 Enhancers ES-I3 Cell Line embryonic stem cell
41 chr1:162115800-162116200 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
42 chr1:162115800-162116200 Weak transcription Gastric stomach
43 chr1:162115800-162116200 Enhancers Right Atrium heart
44 chr1:162115800-162116400 Enhancers Brain Germinal Matrix brain
45 chr1:162115800-162116400 Enhancers Brain Inferior Temporal Lobe brain
46 chr1:162115800-162118000 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
47 chr1:162115800-162119200 Enhancers iPS-15b Cell Line embryonic stem cell
48 chr1:162116000-162116200 Enhancers Brain Cingulate Gyrus brain
49 chr1:162116000-162117400 Enhancers HUES64 Cell Line embryonic stem cell
50 chr1:162116000-162118400 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived

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