The 2.0 version of rSNPBase

Variant report

Variant rs13374070
Chromosome Location chr1:224332078-224332079
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:123 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:224303000-224363400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
2 chr1:224314400-224333800 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
3 chr1:224314400-224343400 Weak transcription Psoas Muscle Psoas
4 chr1:224316600-224352200 Weak transcription ES-WA7 Cell Line embryonic stem cell
5 chr1:224317600-224333400 Strong transcription HUES48 Cell Line embryonic stem cell
6 chr1:224317800-224334000 Strong transcription Fetal Intestine Large intestine
7 chr1:224318200-224333400 Strong transcription Primary T helper cells fromperipheralblood blood
8 chr1:224319200-224334000 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
9 chr1:224319200-224335000 Strong transcription Breast Myoepithelial Primary Cells Breast
10 chr1:224320200-224344800 Weak transcription Gastric stomach
11 chr1:224320200-224345000 Weak transcription Brain Cingulate Gyrus brain
12 chr1:224320200-224345000 Weak transcription HUVEC blood vessel
13 chr1:224320400-224344800 Weak transcription Small Intestine intestine
14 chr1:224320400-224345000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
15 chr1:224320400-224345000 Weak transcription Right Ventricle heart
16 chr1:224320400-224345200 Weak transcription Placenta Amnion Placenta Amnion
17 chr1:224320600-224344000 Weak transcription Brain Germinal Matrix brain
18 chr1:224320600-224345000 Weak transcription Pancreas Pancrea
19 chr1:224320600-224345200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
20 chr1:224320800-224339000 Weak transcription A549 lung
21 chr1:224320800-224343200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
22 chr1:224320800-224344200 Weak transcription Primary T killer naive cells fromperipheralblood blood
23 chr1:224320800-224344800 Weak transcription Primary T killer memory cells from peripheral blood blood
24 chr1:224320800-224345200 Weak transcription Brain Substantia Nigra brain
25 chr1:224321000-224337200 Weak transcription Brain Hippocampus Middle brain
26 chr1:224321000-224338400 Weak transcription Brain Angular Gyrus brain
27 chr1:224321000-224343200 Weak transcription Colon Smooth Muscle Colon
28 chr1:224321000-224343400 Weak transcription Fetal Brain Male brain
29 chr1:224321000-224344200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
30 chr1:224321000-224344800 Weak transcription NHLF lung
31 chr1:224321000-224345000 Weak transcription Rectal Smooth Muscle rectum
32 chr1:224321000-224345400 Weak transcription Fetal Heart heart
33 chr1:224322000-224333400 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
34 chr1:224322000-224345400 Weak transcription HMEC breast
35 chr1:224322400-224336200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
36 chr1:224322400-224337600 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
37 chr1:224322600-224345000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
38 chr1:224323000-224335400 Strong transcription Fetal Intestine Small intestine
39 chr1:224323000-224337000 Weak transcription Skeletal Muscle Female skeletal muscle
40 chr1:224323000-224337200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
41 chr1:224323000-224341000 Weak transcription NH-A brain
42 chr1:224323000-224343200 Weak transcription NHDF-Ad bronchial
43 chr1:224323200-224332200 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
44 chr1:224323400-224332200 Strong transcription Fetal Adrenal Gland Adrenal Gland
45 chr1:224323400-224332800 Strong transcription Fetal Muscle Leg muscle
46 chr1:224324200-224337000 Weak transcription Hela-S3 cervix
47 chr1:224324200-224343800 Weak transcription HepG2 liver
48 chr1:224325000-224351000 Weak transcription iPS-15b Cell Line embryonic stem cell
49 chr1:224325800-224332400 Strong transcription Primary mononuclear cells fromperipheralblood Blood
50 chr1:224326000-224333800 Strong transcription Foreskin Fibroblast Primary Cells skin02 Skin

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Last update: Aug 31, 2015