The 2.0 version of rSNPBase

Variant report

Variant rs4653991
Chromosome Location chr1:224337208-224337209
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:122 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:224303000-224363400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
2 chr1:224314400-224343400 Weak transcription Psoas Muscle Psoas
3 chr1:224316600-224352200 Weak transcription ES-WA7 Cell Line embryonic stem cell
4 chr1:224320200-224344800 Weak transcription Gastric stomach
5 chr1:224320200-224345000 Weak transcription Brain Cingulate Gyrus brain
6 chr1:224320200-224345000 Weak transcription HUVEC blood vessel
7 chr1:224320400-224344800 Weak transcription Small Intestine intestine
8 chr1:224320400-224345000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
9 chr1:224320400-224345000 Weak transcription Right Ventricle heart
10 chr1:224320400-224345200 Weak transcription Placenta Amnion Placenta Amnion
11 chr1:224320600-224344000 Weak transcription Brain Germinal Matrix brain
12 chr1:224320600-224345000 Weak transcription Pancreas Pancrea
13 chr1:224320600-224345200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
14 chr1:224320800-224339000 Weak transcription A549 lung
15 chr1:224320800-224343200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
16 chr1:224320800-224344200 Weak transcription Primary T killer naive cells fromperipheralblood blood
17 chr1:224320800-224344800 Weak transcription Primary T killer memory cells from peripheral blood blood
18 chr1:224320800-224345200 Weak transcription Brain Substantia Nigra brain
19 chr1:224321000-224338400 Weak transcription Brain Angular Gyrus brain
20 chr1:224321000-224343200 Weak transcription Colon Smooth Muscle Colon
21 chr1:224321000-224343400 Weak transcription Fetal Brain Male brain
22 chr1:224321000-224344200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
23 chr1:224321000-224344800 Weak transcription NHLF lung
24 chr1:224321000-224345000 Weak transcription Rectal Smooth Muscle rectum
25 chr1:224321000-224345400 Weak transcription Fetal Heart heart
26 chr1:224322000-224345400 Weak transcription HMEC breast
27 chr1:224322400-224337600 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
28 chr1:224322600-224345000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
29 chr1:224323000-224341000 Weak transcription NH-A brain
30 chr1:224323000-224343200 Weak transcription NHDF-Ad bronchial
31 chr1:224324200-224343800 Weak transcription HepG2 liver
32 chr1:224325000-224351000 Weak transcription iPS-15b Cell Line embryonic stem cell
33 chr1:224326200-224345200 Weak transcription Colonic Mucosa Colon
34 chr1:224326800-224344000 Weak transcription Cortex derived primary cultured neurospheres brain
35 chr1:224327000-224340200 Weak transcription ES-I3 Cell Line embryonic stem cell
36 chr1:224327000-224345000 Weak transcription GM12878-XiMat blood
37 chr1:224327200-224341000 Weak transcription Rectal Mucosa Donor 31 rectum
38 chr1:224327400-224343200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
39 chr1:224327400-224343400 Weak transcription Brain Inferior Temporal Lobe brain
40 chr1:224327400-224344000 Weak transcription H9 Cell Line embryonic stem cell
41 chr1:224327600-224340200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
42 chr1:224327600-224340800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
43 chr1:224327600-224356400 Weak transcription Primary T helper naive cells from peripheral blood blood
44 chr1:224327800-224341400 Weak transcription Lung lung
45 chr1:224327800-224344000 Weak transcription Left Ventricle heart
46 chr1:224327800-224345000 Weak transcription Aorta Aorta
47 chr1:224327800-224345000 Weak transcription Esophagus oesophagus
48 chr1:224328000-224343600 Weak transcription Muscle Satellite Cultured Cells --
49 chr1:224328000-224344600 Weak transcription Primary neutrophils fromperipheralblood blood
50 chr1:224328200-224340200 Weak transcription HSMM muscle

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Last update: Aug 31, 2015