The 2.0 version of rSNPBase

Variant report

Variant rs13383126
Chromosome Location chr2:40508165-40508166
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:60 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:40498400-40509800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
2 chr2:40500200-40514600 Weak transcription Fetal Brain Male brain
3 chr2:40503000-40508400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
4 chr2:40503600-40509600 Weak transcription Left Ventricle heart
5 chr2:40503600-40510200 Weak transcription Brain Cingulate Gyrus brain
6 chr2:40503600-40514800 Weak transcription Primary monocytes fromperipheralblood blood
7 chr2:40504000-40510600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
8 chr2:40504000-40510800 Weak transcription Monocytes-CD14+_RO01746 blood
9 chr2:40506000-40509200 Enhancers Fetal Intestine Small intestine
10 chr2:40506200-40510800 Enhancers HMEC breast
11 chr2:40506400-40508200 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
12 chr2:40506400-40508200 Weak transcription Fetal Lung lung
13 chr2:40506400-40510600 Enhancers Fetal Heart heart
14 chr2:40506400-40516800 Weak transcription Small Intestine intestine
15 chr2:40506600-40508200 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
16 chr2:40506600-40508200 Weak transcription Aorta Aorta
17 chr2:40506600-40508200 Weak transcription GM12878-XiMat blood
18 chr2:40506600-40508400 Weak transcription Fetal Adrenal Gland Adrenal Gland
19 chr2:40506600-40508400 Weak transcription Right Atrium heart
20 chr2:40506600-40509400 Weak transcription Duodenum Mucosa Duodenum
21 chr2:40506600-40511000 Enhancers Breast Myoepithelial Primary Cells Breast
22 chr2:40506600-40514600 Weak transcription Brain Germinal Matrix brain
23 chr2:40506800-40508200 Weak transcription Fetal Stomach stomach
24 chr2:40506800-40508600 Enhancers Muscle Satellite Cultured Cells --
25 chr2:40506800-40508600 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
26 chr2:40506800-40509400 Enhancers Rectal Smooth Muscle rectum
27 chr2:40506800-40509400 Enhancers NHDF-Ad bronchial
28 chr2:40506800-40509600 Enhancers Colon Smooth Muscle Colon
29 chr2:40506800-40510000 Weak transcription Brain Angular Gyrus brain
30 chr2:40506800-40510400 Weak transcription Brain Substantia Nigra brain
31 chr2:40506800-40517200 Weak transcription Dnd41 blood
32 chr2:40507000-40508200 Weak transcription Adipose Nuclei Adipose
33 chr2:40507000-40508200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
34 chr2:40507000-40508200 Weak transcription Fetal Muscle Leg muscle
35 chr2:40507000-40508200 Weak transcription Right Ventricle heart
36 chr2:40507000-40508200 Enhancers Osteobl bone
37 chr2:40507000-40508600 Enhancers Duodenum Smooth Muscle Duodenum
38 chr2:40507000-40508600 Enhancers HSMM muscle
39 chr2:40507000-40509600 Weak transcription Psoas Muscle Psoas
40 chr2:40507200-40508200 Weak transcription Stomach Smooth Muscle stomach
41 chr2:40507400-40511000 Enhancers NHEK skin
42 chr2:40507600-40508600 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
43 chr2:40507600-40508600 Enhancers Skeletal Muscle Female skeletal muscle
44 chr2:40507600-40509000 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
45 chr2:40507600-40509200 Enhancers Fetal Intestine Large intestine
46 chr2:40507600-40509800 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
47 chr2:40507600-40510600 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
48 chr2:40507600-40511200 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
49 chr2:40507800-40508800 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
50 chr2:40507800-40508800 Enhancers Brain Anterior Caudate brain

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015