The 2.0 version of rSNPBase

Variant report

Variant rs13393938
Chromosome Location chr2:39027647-39027648
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:123 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:39005800-39037400 Weak transcription Esophagus oesophagus
2 chr2:39006000-39037600 Weak transcription Aorta Aorta
3 chr2:39006000-39037600 Weak transcription Gastric stomach
4 chr2:39006200-39029200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
5 chr2:39006200-39029800 Weak transcription Sigmoid Colon Sigmoid Colon
6 chr2:39006200-39031800 Weak transcription Right Ventricle heart
7 chr2:39006400-39029600 Weak transcription ES-I3 Cell Line embryonic stem cell
8 chr2:39006400-39037800 Weak transcription Primary T killer memory cells from peripheral blood blood
9 chr2:39006400-39045600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
10 chr2:39006400-39085600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
11 chr2:39006600-39031600 Weak transcription Muscle Satellite Cultured Cells --
12 chr2:39006600-39032200 Weak transcription Colon Smooth Muscle Colon
13 chr2:39006600-39033600 Weak transcription GM12878-XiMat blood
14 chr2:39006600-39038200 Weak transcription Rectal Smooth Muscle rectum
15 chr2:39006800-39031800 Weak transcription Fetal Brain Male brain
16 chr2:39009000-39027800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
17 chr2:39009000-39029200 Weak transcription Skeletal Muscle Male skeletal muscle
18 chr2:39009000-39037400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
19 chr2:39009200-39027800 Weak transcription Brain Substantia Nigra brain
20 chr2:39009200-39029600 Weak transcription Primary T regulatory cells fromperipheralblood blood
21 chr2:39009200-39029800 Weak transcription Primary T cells fromperipheralblood blood
22 chr2:39009200-39032000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
23 chr2:39009200-39032000 Weak transcription K562 blood
24 chr2:39009200-39032400 Weak transcription Primary B cells from cord blood blood
25 chr2:39009200-39032400 Weak transcription Brain Angular Gyrus brain
26 chr2:39009200-39037600 Weak transcription H1 Cell Line embryonic stem cell
27 chr2:39009200-39037600 Weak transcription Primary hematopoietic stem cells blood
28 chr2:39009200-39037600 Weak transcription Brain Inferior Temporal Lobe brain
29 chr2:39009200-39037600 Weak transcription Placenta Amnion Placenta Amnion
30 chr2:39009200-39037600 Weak transcription NHDF-Ad bronchial
31 chr2:39009200-39037800 Weak transcription NHEK skin
32 chr2:39009200-39042600 Weak transcription Fetal Kidney kidney
33 chr2:39009200-39050000 Weak transcription HMEC breast
34 chr2:39009200-39052800 Weak transcription Primary T helper naive cells from peripheral blood blood
35 chr2:39009400-39037600 Weak transcription NHLF lung
36 chr2:39009600-39029200 Weak transcription Primary T helper cells fromperipheralblood blood
37 chr2:39009600-39031800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
38 chr2:39009600-39037600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
39 chr2:39009600-39037600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
40 chr2:39009800-39029200 Weak transcription Primary T helper naive cells fromperipheralblood blood
41 chr2:39012000-39037600 Weak transcription Pancreas Pancrea
42 chr2:39012200-39037600 Weak transcription iPS-15b Cell Line embryonic stem cell
43 chr2:39017600-39042200 Weak transcription Small Intestine intestine
44 chr2:39018400-39037600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
45 chr2:39019000-39057800 Weak transcription Primary neutrophils fromperipheralblood blood
46 chr2:39019400-39029800 Weak transcription HUES64 Cell Line embryonic stem cell
47 chr2:39020800-39029600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
48 chr2:39021400-39038000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
49 chr2:39021600-39038000 Weak transcription Colonic Mucosa Colon
50 chr2:39021800-39031800 Weak transcription Rectal Mucosa Donor 29 rectum

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Last update: Aug 31, 2015