Variant report
| Variant | rs1339573 |
|---|---|
| Chromosome Location | chr1:184560216-184560217 |
| allele | A/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr1:184546200-184563800 | Weak transcription | ES-UCSF4 Cell Line | embryonic stem cell |
| 2 | chr1:184546200-184566600 | Weak transcription | Left Ventricle | heart |
| 3 | chr1:184547800-184580000 | Weak transcription | Colon Smooth Muscle | Colon |
| 4 | chr1:184549400-184564600 | Weak transcription | NHDF-Ad | bronchial |
| 5 | chr1:184553200-184566200 | Weak transcription | hESC Derived CD56+ Ectoderm Cultured Cells | ES cell derived |
| 6 | chr1:184553200-184566600 | Weak transcription | Fetal Stomach | stomach |
| 7 | chr1:184553600-184566200 | Weak transcription | Primary hematopoietic stem cells G-CSF-mobilized Female | -- |
| 8 | chr1:184553600-184566200 | Weak transcription | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
| 9 | chr1:184555400-184561800 | Weak transcription | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
| 10 | chr1:184557000-184566400 | Weak transcription | Psoas Muscle | Psoas |
| 11 | chr1:184557000-184566400 | Weak transcription | Skeletal Muscle Male | skeletal muscle |
| 12 | chr1:184557200-184566400 | Weak transcription | Skeletal Muscle Female | skeletal muscle |
| 13 | chr1:184557200-184574000 | Weak transcription | Fetal Muscle Trunk | muscle |
| 14 | chr1:184557200-184591600 | Weak transcription | Aorta | Aorta |
| 15 | chr1:184558000-184560400 | Enhancers | Stomach Mucosa | stomach |
| 16 | chr1:184558000-184560600 | Enhancers | Fetal Intestine Large | intestine |
| 17 | chr1:184558000-184560600 | Enhancers | Fetal Intestine Small | intestine |
| 18 | chr1:184558400-184561800 | Weak transcription | A549 | lung |
| 19 | chr1:184558600-184564600 | Weak transcription | IMR90 fetal lung fibroblasts Cell Line | lung |
| 20 | chr1:184558600-184564800 | Weak transcription | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 21 | chr1:184558600-184566400 | Weak transcription | Fetal Muscle Leg | muscle |
| 22 | chr1:184558600-184568000 | Weak transcription | Pancreas | Pancrea |
| 23 | chr1:184558600-184572600 | Weak transcription | Lung | lung |
| 24 | chr1:184558800-184566600 | Weak transcription | Fetal Lung | lung |
| 25 | chr1:184559000-184588400 | Weak transcription | Primary Natural Killer cells fromperipheralblood | blood |
| 26 | chr1:184559200-184562000 | Weak transcription | Stomach Smooth Muscle | stomach |
| 27 | chr1:184559200-184564400 | Weak transcription | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
| 28 | chr1:184559200-184564800 | Weak transcription | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
| 29 | chr1:184559200-184566600 | Weak transcription | Right Ventricle | heart |
| 30 | chr1:184559200-184580400 | Weak transcription | Adipose Nuclei | Adipose |
| 31 | chr1:184559400-184580400 | Weak transcription | Duodenum Smooth Muscle | Duodenum |
| 32 | chr1:184559600-184560400 | Enhancers | Rectal Mucosa Donor 31 | rectum |
| 33 | chr1:184559600-184563600 | Weak transcription | H9 Derived Neuron Cultured Cells | ES cell derived |
| 34 | chr1:184559600-184564600 | Weak transcription | Foreskin Keratinocyte Primary Cells skin02 | Skin |
| 35 | chr1:184559600-184564800 | Weak transcription | Foreskin Keratinocyte Primary Cells skin03 | Skin |
| 36 | chr1:184559600-184565000 | Weak transcription | Placenta Amnion | Placenta Amnion |
| 37 | chr1:184559600-184578000 | Weak transcription | Ganglion Eminence derived primary cultured neurospheres | brain |
| 38 | chr1:184559800-184560800 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 39 | chr1:184559800-184561600 | Weak transcription | Breast Myoepithelial Primary Cells | Breast |
| 40 | chr1:184559800-184561800 | Weak transcription | Duodenum Mucosa | Duodenum |
| 41 | chr1:184559800-184563400 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
| 42 | chr1:184559800-184564200 | Weak transcription | NHEK | skin |
| 43 | chr1:184559800-184564800 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 44 | chr1:184559800-184566200 | Weak transcription | Foreskin Melanocyte Primary Cells skin03 | Skin |
| 45 | chr1:184559800-184566400 | Weak transcription | Foreskin Melanocyte Primary Cells skin01 | Skin |
| 46 | chr1:184560000-184560400 | Enhancers | Rectal Mucosa Donor 29 | rectum |
| 47 | chr1:184560000-184562000 | Weak transcription | Placenta | Placenta |
| 48 | chr1:184560000-184564800 | Weak transcription | HMEC | breast |
| 49 | chr1:184560200-184560400 | Enhancers | Small Intestine | intestine |
| 50 | chr1:184560200-184566600 | Weak transcription | Liver | Liver |
