The 2.0 version of rSNPBase

Variant report

Variant rs13406449
Chromosome Location chr2:234306819-234306820
allele C/G/T
Outlinks Ensembl   UCSC
Chromatin state (count:109 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:234264600-234307600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
2 chr2:234270000-234322400 Weak transcription Placenta Amnion Placenta Amnion
3 chr2:234272800-234313200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
4 chr2:234277600-234322200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
5 chr2:234289000-234307600 Weak transcription HUES64 Cell Line embryonic stem cell
6 chr2:234293200-234307600 Weak transcription iPS-18 Cell Line embryonic stem cell
7 chr2:234293800-234308000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
8 chr2:234293800-234308000 Weak transcription HUES6 Cell Line embryonic stem cell
9 chr2:234294600-234318800 Strong transcription Monocytes-CD14+_RO01746 blood
10 chr2:234295400-234313000 Weak transcription Small Intestine intestine
11 chr2:234295600-234307600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
12 chr2:234295800-234308000 Weak transcription H1 Cell Line embryonic stem cell
13 chr2:234295800-234318200 Weak transcription K562 blood
14 chr2:234296400-234307600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
15 chr2:234296600-234307800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
16 chr2:234296800-234307800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
17 chr2:234296800-234308200 Weak transcription Stomach Mucosa stomach
18 chr2:234296800-234309000 Weak transcription Esophagus oesophagus
19 chr2:234297200-234307200 Weak transcription Duodenum Smooth Muscle Duodenum
20 chr2:234297200-234307800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
21 chr2:234297200-234307800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
22 chr2:234297200-234307800 Weak transcription Brain Cingulate Gyrus brain
23 chr2:234297200-234308000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
24 chr2:234297200-234308000 Weak transcription Left Ventricle heart
25 chr2:234297200-234308800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
26 chr2:234297200-234310600 Weak transcription Fetal Brain Female brain
27 chr2:234297200-234310600 Weak transcription HUVEC blood vessel
28 chr2:234297200-234311000 Weak transcription Fetal Brain Male brain
29 chr2:234297200-234311400 Weak transcription Brain Substantia Nigra brain
30 chr2:234297200-234314600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
31 chr2:234297200-234316800 Weak transcription Aorta Aorta
32 chr2:234297200-234317000 Weak transcription Placenta Placenta
33 chr2:234297200-234317000 Weak transcription Skeletal Muscle Female skeletal muscle
34 chr2:234297200-234317200 Weak transcription Pancreas Pancrea
35 chr2:234297200-234317400 Weak transcription Brain Angular Gyrus brain
36 chr2:234297200-234317400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
37 chr2:234297200-234318600 Weak transcription Cortex derived primary cultured neurospheres brain
38 chr2:234297200-234319000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
39 chr2:234297200-234319000 Weak transcription Fetal Kidney kidney
40 chr2:234297200-234319400 Weak transcription Brain Hippocampus Middle brain
41 chr2:234297200-234322000 Weak transcription Hela-S3 cervix
42 chr2:234297200-234322200 Weak transcription Brain Anterior Caudate brain
43 chr2:234297400-234307800 Weak transcription iPS-20b Cell Line embryonic stem cell
44 chr2:234297400-234309600 Weak transcription Brain Germinal Matrix brain
45 chr2:234297400-234316200 Weak transcription Fetal Lung lung
46 chr2:234298000-234314600 Weak transcription Stomach Smooth Muscle stomach
47 chr2:234298000-234317200 Weak transcription Skeletal Muscle Male skeletal muscle
48 chr2:234298200-234308200 Weak transcription H9 Cell Line embryonic stem cell
49 chr2:234298600-234316200 Weak transcription Colon Smooth Muscle Colon
50 chr2:234299000-234307800 Strong transcription Fetal Stomach stomach

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Last update: Aug 31, 2015