Variant report

Variant	rs59148909
Chromosome Location	chr2:234146927-234146928
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 9 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:9)

rs_ID	r²[population]
rs10170001	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs13403445	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs13406449	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs13426533	1.00[AMR][1000 genomes]
rs57845501	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs58172277	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs59937078	1.00[AMR][1000 genomes]
rs73110079	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73110095	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]

No data

Chromatin state (count:25 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:234138000-234151200	Enhancers	Primary Natural Killer cells fromperipheralblood	blood
2	chr2:234138400-234151200	Enhancers	Primary T cells fromperipheralblood	blood
3	chr2:234140000-234148400	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
4	chr2:234143200-234148400	Weak transcription	Monocytes-CD14+_RO01746	blood
5	chr2:234143400-234148400	Weak transcription	Primary neutrophils fromperipheralblood	blood
6	chr2:234143800-234148600	Weak transcription	Fetal Thymus	thymus
7	chr2:234144200-234149400	Weak transcription	Stomach Mucosa	stomach
8	chr2:234144600-234150400	Weak transcription	Esophagus	oesophagus
9	chr2:234144800-234147000	Enhancers	K562	blood
10	chr2:234145400-234150600	Weak transcription	Skeletal Muscle Female	skeletal muscle
11	chr2:234145600-234148000	Enhancers	Primary T helper 17 cells PMA-I stimulated	--
12	chr2:234145600-234148200	Enhancers	Primary T helper naive cells from peripheral blood	blood
13	chr2:234145600-234149400	Enhancers	Primary T helper memory cells from peripheral blood 1	blood
14	chr2:234145600-234151400	Enhancers	Primary T helper cells fromperipheralblood	blood
15	chr2:234145600-234152000	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
16	chr2:234145600-234153600	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
17	chr2:234146000-234148200	Enhancers	Primary T cells effector/memory enriched fromperipheralblood	blood
18	chr2:234146000-234149400	Enhancers	Primary T helper naive cells fromperipheralblood	blood
19	chr2:234146000-234149400	Enhancers	Primary T helper cells PMA-I stimulated	--
20	chr2:234146000-234151200	Enhancers	Primary T killer naive cells fromperipheralblood	blood
21	chr2:234146200-234149400	Enhancers	Primary T regulatory cells fromperipheralblood	blood
22	chr2:234146200-234149400	Enhancers	Primary T killer memory cells from peripheral blood	blood
23	chr2:234146600-234147200	Bivalent Enhancer	HepG2	liver
24	chr2:234146600-234148600	Weak transcription	Spleen	Spleen
25	chr2:234146600-234149400	Enhancers	Primary T cells from cord blood	blood

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