The 2.0 version of rSNPBase

Variant report

Variant rs13409759
Chromosome Location chr2:234152472-234152473
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:39 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:234145600-234153600 Enhancers Primary T helper memory cells from peripheral blood 2 blood
2 chr2:234149400-234152600 Enhancers Stomach Mucosa stomach
3 chr2:234149400-234153600 Enhancers K562 blood
4 chr2:234150400-234153000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
5 chr2:234150800-234153000 Weak transcription HMEC breast
6 chr2:234150800-234153200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
7 chr2:234151000-234153200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
8 chr2:234151000-234153200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
9 chr2:234151000-234153200 Weak transcription Hela-S3 cervix
10 chr2:234151000-234155200 Weak transcription Primary T helper naive cells fromperipheralblood blood
11 chr2:234151000-234155600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
12 chr2:234151200-234153000 Weak transcription NHEK skin
13 chr2:234151200-234153200 Weak transcription Fetal Thymus thymus
14 chr2:234151200-234153400 Weak transcription A549 lung
15 chr2:234151200-234153800 Enhancers Primary monocytes fromperipheralblood blood
16 chr2:234151200-234155200 Weak transcription Primary T cells fromperipheralblood blood
17 chr2:234151200-234155200 Weak transcription Primary T helper cells PMA-I stimulated --
18 chr2:234151200-234155200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
19 chr2:234151200-234155600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
20 chr2:234151200-234155800 Weak transcription Primary T helper naive cells from peripheral blood blood
21 chr2:234151200-234155800 Weak transcription Primary T regulatory cells fromperipheralblood blood
22 chr2:234151200-234155800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
23 chr2:234151200-234155800 Weak transcription Primary T killer naive cells fromperipheralblood blood
24 chr2:234151200-234155800 Weak transcription Rectal Mucosa Donor 29 rectum
25 chr2:234151200-234159800 Weak transcription Sigmoid Colon Sigmoid Colon
26 chr2:234151400-234153000 Enhancers Primary neutrophils fromperipheralblood blood
27 chr2:234151400-234153000 Weak transcription Primary hematopoietic stem cells short term culture blood
28 chr2:234151400-234153200 Weak transcription Duodenum Mucosa Duodenum
29 chr2:234151400-234155800 Weak transcription Primary T cells from cord blood blood
30 chr2:234151400-234155800 Weak transcription Rectal Mucosa Donor 31 rectum
31 chr2:234151600-234157200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
32 chr2:234151800-234154200 Enhancers Placenta Amnion Placenta Amnion
33 chr2:234152000-234152800 Enhancers Spleen Spleen
34 chr2:234152000-234154000 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
35 chr2:234152000-234155800 Weak transcription Primary T killer memory cells from peripheral blood blood
36 chr2:234152000-234157200 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
37 chr2:234152200-234152600 Weak transcription Primary B cells from cord blood blood
38 chr2:234152200-234153800 Enhancers Monocytes-CD14+_RO01746 blood
39 chr2:234152400-234152600 Enhancers Primary T helper cells fromperipheralblood blood

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Last update: Aug 31, 2015