Variant report

Variant rs13410143
Chromosome Location chr2:48551777-48551778
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:84 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:48543200-48553200 Weak transcription Sigmoid Colon Sigmoid Colon
2 chr2:48543400-48551800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
3 chr2:48543400-48552000 Weak transcription Stomach Mucosa stomach
4 chr2:48543400-48553000 Weak transcription Lung lung
5 chr2:48543400-48553000 Weak transcription Psoas Muscle Psoas
6 chr2:48543400-48568600 Weak transcription HSMM muscle
7 chr2:48543600-48552000 Weak transcription Duodenum Mucosa Duodenum
8 chr2:48543600-48552200 Weak transcription Osteobl bone
9 chr2:48543600-48553200 Weak transcription H9 Cell Line embryonic stem cell
10 chr2:48543600-48553400 Weak transcription Rectal Smooth Muscle rectum
11 chr2:48543600-48554400 Enhancers Primary T helper memory cells from peripheral blood 2 blood
12 chr2:48543600-48555400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
13 chr2:48543600-48556600 Weak transcription H1 Cell Line embryonic stem cell
14 chr2:48543600-48559400 Weak transcription Rectal Mucosa Donor 29 rectum
15 chr2:48543600-48561000 Enhancers Primary T helper memory cells from peripheral blood 1 blood
16 chr2:48543600-48570600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
17 chr2:48544200-48559600 Weak transcription Fetal Kidney kidney
18 chr2:48544400-48552000 Weak transcription Hela-S3 cervix
19 chr2:48544400-48556200 Weak transcription NHDF-Ad bronchial
20 chr2:48544400-48558600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
21 chr2:48544400-48570400 Weak transcription NHEK skin
22 chr2:48544400-48570800 Weak transcription HMEC breast
23 chr2:48544600-48558600 Weak transcription Spleen Spleen
24 chr2:48544600-48564400 Weak transcription Fetal Intestine Small intestine
25 chr2:48544800-48559400 Weak transcription Right Atrium heart
26 chr2:48545800-48552000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
27 chr2:48546000-48551800 Weak transcription Brain Anterior Caudate brain
28 chr2:48546000-48552000 Weak transcription Brain Angular Gyrus brain
29 chr2:48546400-48552000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
30 chr2:48546400-48552000 Enhancers Primary T helper cells PMA-I stimulated --
31 chr2:48546400-48552000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
32 chr2:48546600-48556200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
33 chr2:48547400-48554600 Enhancers Primary T helper 17 cells PMA-I stimulated --
34 chr2:48548000-48552000 Weak transcription Cortex derived primary cultured neurospheres brain
35 chr2:48548200-48552000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
36 chr2:48548200-48552200 Weak transcription Liver Liver
37 chr2:48548200-48555200 Weak transcription Primary hematopoietic stem cells blood
38 chr2:48548400-48551800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
39 chr2:48548400-48552400 Weak transcription Skeletal Muscle Female skeletal muscle
40 chr2:48548400-48553000 Weak transcription Small Intestine intestine
41 chr2:48548400-48553200 Weak transcription Adipose Nuclei Adipose
42 chr2:48548400-48555200 Weak transcription Primary hematopoietic stem cells short term culture blood
43 chr2:48548400-48556600 Weak transcription Skeletal Muscle Male skeletal muscle
44 chr2:48548600-48570600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
45 chr2:48549800-48552000 Weak transcription Primary B cells from peripheral blood blood
46 chr2:48549800-48555000 Weak transcription Dnd41 blood
47 chr2:48550000-48553200 Enhancers HUES6 Cell Line embryonic stem cell
48 chr2:48550000-48553400 Enhancers iPS-18 Cell Line embryonic stem cell
49 chr2:48550000-48553800 Enhancers Primary T killer memory cells from peripheral blood blood
50 chr2:48550400-48554600 Enhancers Primary T helper cells fromperipheralblood blood

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