Variant report

Variant	rs13422625
Chromosome Location	chr2:213542950-213542951
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 55 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:55)

rs_ID	r²[population]
rs10221625	0.91[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs10221626	0.91[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs11682456	0.88[ASN][1000 genomes]
rs11695521	0.90[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs11896992	0.87[EUR][1000 genomes]
rs1320116	0.85[AMR][1000 genomes];0.94[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs1320117	0.92[ASN][1000 genomes]
rs13386921	0.84[EUR][1000 genomes]
rs13394068	0.88[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs13404902	0.85[AMR][1000 genomes];0.97[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs13431135	0.86[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs13431628	0.88[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs1600883	0.85[EUR][1000 genomes]
rs1600884	0.86[EUR][1000 genomes]
rs17272381	0.92[ASN][1000 genomes]
rs17331646	0.92[ASN][1000 genomes]
rs17331821	0.94[ASN][1000 genomes]
rs17331933	0.90[ASN][1000 genomes]
rs17331989	0.90[ASN][1000 genomes]
rs2220026	0.84[EUR][1000 genomes]
rs2371711	0.92[ASN][1000 genomes]
rs2371712	0.98[ASN][1000 genomes]
rs2371713	0.98[ASN][1000 genomes]
rs2371714	0.90[ASN][1000 genomes]
rs2888129	0.92[ASN][1000 genomes]
rs2888130	0.88[ASN][1000 genomes]
rs34186216	0.90[ASN][1000 genomes]
rs4335896	0.92[ASN][1000 genomes]
rs4673674	0.87[EUR][1000 genomes]
rs4673675	0.91[AMR][1000 genomes];0.95[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs4673676	0.97[AFR][1000 genomes];0.98[AMR][1000 genomes];0.95[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs56249218	0.90[ASN][1000 genomes]
rs58184703	0.87[EUR][1000 genomes]
rs62187967	0.84[EUR][1000 genomes]
rs62187968	0.84[EUR][1000 genomes]
rs6435715	0.85[EUR][1000 genomes]
rs6435716	0.86[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs6435717	0.88[AMR][1000 genomes];0.91[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs6435721	1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[ASN][1000 genomes]
rs6743091	0.83[EUR][1000 genomes]
rs6750857	0.81[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs6752019	0.92[ASN][1000 genomes]
rs6752288	0.92[ASN][1000 genomes]
rs72933051	0.92[ASN][1000 genomes]
rs72933053	0.92[ASN][1000 genomes]
rs72933070	0.90[ASN][1000 genomes]
rs72933071	0.92[ASN][1000 genomes]
rs72933073	0.92[ASN][1000 genomes]
rs72933082	0.90[ASN][1000 genomes]
rs72933094	0.90[ASN][1000 genomes]
rs72933095	0.90[ASN][1000 genomes]
rs7572637	0.84[EUR][1000 genomes]
rs7587236	0.83[EUR][1000 genomes]
rs7590700	0.83[EUR][1000 genomes]
rs9967727	0.90[AMR][1000 genomes];0.94[EUR][1000 genomes];0.96[ASN][1000 genomes]

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:213531200-213547800	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
2	chr2:213542400-213543200	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived

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