The 2.0 version of rSNPBase

Variant report

Variant rs13426218
Chromosome Location chr2:190592854-190592855
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:53 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:190540800-190611800 Weak transcription Sigmoid Colon Sigmoid Colon
2 chr2:190540800-190618400 Weak transcription Brain Cingulate Gyrus brain
3 chr2:190541600-190617000 Weak transcription Colon Smooth Muscle Colon
4 chr2:190550800-190617000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
5 chr2:190550800-190626800 Weak transcription Right Ventricle heart
6 chr2:190551200-190603400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
7 chr2:190551200-190617000 Weak transcription HSMM muscle
8 chr2:190555600-190593000 Weak transcription Fetal Lung lung
9 chr2:190557400-190617000 Weak transcription Brain Angular Gyrus brain
10 chr2:190563400-190607800 Weak transcription Primary T cells from cord blood blood
11 chr2:190563600-190593200 Weak transcription Rectal Mucosa Donor 31 rectum
12 chr2:190563600-190608400 Weak transcription Brain Anterior Caudate brain
13 chr2:190563600-190611800 Weak transcription Brain Substantia Nigra brain
14 chr2:190563600-190612600 Weak transcription Brain Inferior Temporal Lobe brain
15 chr2:190564000-190593200 Weak transcription Liver Liver
16 chr2:190568200-190594200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
17 chr2:190568200-190611600 Weak transcription Skeletal Muscle Male skeletal muscle
18 chr2:190571600-190606800 Weak transcription Primary B cells from cord blood blood
19 chr2:190571600-190607800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
20 chr2:190571600-190608400 Weak transcription Duodenum Smooth Muscle Duodenum
21 chr2:190571600-190612400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
22 chr2:190571800-190608600 Weak transcription Duodenum Mucosa Duodenum
23 chr2:190572000-190608400 Weak transcription Primary T helper cells fromperipheralblood blood
24 chr2:190573000-190606600 Weak transcription Rectal Mucosa Donor 29 rectum
25 chr2:190573000-190611000 Weak transcription Stomach Smooth Muscle stomach
26 chr2:190575000-190615800 Weak transcription Fetal Kidney kidney
27 chr2:190576800-190593000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
28 chr2:190576800-190608200 Weak transcription Primary hematopoietic stem cells blood
29 chr2:190576800-190609000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
30 chr2:190576800-190627000 Weak transcription Pancreas Pancrea
31 chr2:190577000-190604400 Weak transcription Breast Myoepithelial Primary Cells Breast
32 chr2:190577000-190611600 Weak transcription Ovary ovary
33 chr2:190577000-190622600 Weak transcription Aorta Aorta
34 chr2:190577200-190593200 Weak transcription Left Ventricle heart
35 chr2:190577200-190611800 Weak transcription Fetal Stomach stomach
36 chr2:190580000-190611000 Weak transcription Fetal Intestine Large intestine
37 chr2:190580000-190611600 Weak transcription Fetal Adrenal Gland Adrenal Gland
38 chr2:190583000-190626800 Weak transcription Psoas Muscle Psoas
39 chr2:190585200-190608200 Weak transcription Primary monocytes fromperipheralblood blood
40 chr2:190585400-190606600 Weak transcription Fetal Muscle Trunk muscle
41 chr2:190588600-190606800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
42 chr2:190588600-190608400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
43 chr2:190589400-190626600 Weak transcription HUVEC blood vessel
44 chr2:190589600-190611600 Weak transcription Fetal Intestine Small intestine
45 chr2:190590400-190610000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
46 chr2:190590800-190614800 Weak transcription Esophagus oesophagus
47 chr2:190591000-190612800 Weak transcription Rectal Smooth Muscle rectum
48 chr2:190591200-190595600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
49 chr2:190591200-190611200 Weak transcription Fetal Thymus thymus
50 chr2:190591800-190611800 Weak transcription Fetal Muscle Leg muscle

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Last update: Aug 31, 2015