The 2.0 version of rSNPBase

Variant report

Variant rs13426962
Chromosome Location chr2:54074954-54074955
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:74 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:54025800-54085600 Weak transcription Pancreatic Islets Pancreatic Islet
2 chr2:54046600-54080200 Weak transcription Skeletal Muscle Female skeletal muscle
3 chr2:54046600-54080200 Weak transcription NHDF-Ad bronchial
4 chr2:54046800-54080400 Weak transcription Rectal Smooth Muscle rectum
5 chr2:54047000-54080200 Weak transcription Sigmoid Colon Sigmoid Colon
6 chr2:54047000-54080200 Weak transcription A549 lung
7 chr2:54047000-54080400 Weak transcription Gastric stomach
8 chr2:54047000-54080400 Weak transcription Pancreas Pancrea
9 chr2:54047000-54080800 Weak transcription Aorta Aorta
10 chr2:54047200-54077000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
11 chr2:54047200-54080000 Weak transcription Primary T helper cells fromperipheralblood blood
12 chr2:54047200-54080200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
13 chr2:54047200-54080200 Weak transcription Muscle Satellite Cultured Cells --
14 chr2:54047200-54080200 Weak transcription Fetal Muscle Trunk muscle
15 chr2:54047200-54080400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
16 chr2:54047200-54080400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
17 chr2:54047200-54080800 Weak transcription Primary B cells from peripheral blood blood
18 chr2:54047600-54080400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
19 chr2:54047600-54080800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
20 chr2:54050200-54080400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
21 chr2:54050400-54080200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
22 chr2:54050600-54080200 Weak transcription Fetal Stomach stomach
23 chr2:54051000-54080000 Weak transcription Osteobl bone
24 chr2:54054000-54080400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
25 chr2:54054400-54080400 Weak transcription NHLF lung
26 chr2:54055000-54075000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
27 chr2:54055200-54075000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
28 chr2:54055200-54080400 Weak transcription Ovary ovary
29 chr2:54055200-54081000 Weak transcription Psoas Muscle Psoas
30 chr2:54055400-54076400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
31 chr2:54055400-54080000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
32 chr2:54056200-54080200 Weak transcription Fetal Muscle Leg muscle
33 chr2:54056800-54080200 Weak transcription Brain Substantia Nigra brain
34 chr2:54057200-54080200 Weak transcription Brain Angular Gyrus brain
35 chr2:54057200-54080200 Weak transcription Brain Inferior Temporal Lobe brain
36 chr2:54057200-54080200 Weak transcription Fetal Brain Female brain
37 chr2:54057200-54080200 Weak transcription Left Ventricle heart
38 chr2:54057400-54080200 Weak transcription Brain Hippocampus Middle brain
39 chr2:54060000-54080200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
40 chr2:54060000-54080200 Weak transcription Duodenum Smooth Muscle Duodenum
41 chr2:54060200-54080200 Weak transcription Primary T cells from cord blood blood
42 chr2:54061600-54080200 Weak transcription Primary B cells from cord blood blood
43 chr2:54063200-54078200 Weak transcription Adipose Nuclei Adipose
44 chr2:54063200-54080000 Weak transcription Primary hematopoietic stem cells short term culture blood
45 chr2:54063200-54080400 Weak transcription Esophagus oesophagus
46 chr2:54063400-54080200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
47 chr2:54063400-54080200 Weak transcription Brain Cingulate Gyrus brain
48 chr2:54063400-54080200 Weak transcription Lung lung
49 chr2:54064000-54080200 Weak transcription Primary T helper naive cells fromperipheralblood blood
50 chr2:54064400-54077400 Weak transcription Breast Myoepithelial Primary Cells Breast

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Last update: Aug 31, 2015