Variant report

Variant	rs13428730
Chromosome Location	chr2:212116987-212116988
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 12 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:11)

rs_ID	r²[population]
rs10171472	0.85[ASN][1000 genomes]
rs10183762	0.85[ASN][1000 genomes]
rs10200287	0.81[AMR][1000 genomes];0.89[ASN][1000 genomes]
rs13398354	0.81[ASN][1000 genomes]
rs1437917	0.90[ASN][1000 genomes]
rs17691926	0.85[AMR][1000 genomes];0.87[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs17692845	0.80[AMR][1000 genomes];0.86[ASN][1000 genomes]
rs4449073	0.83[ASN][1000 genomes]
rs4471829	0.84[ASN][1000 genomes]
rs6732540	0.81[AMR][1000 genomes];0.87[ASN][1000 genomes]
rs9808372	0.81[AMR][1000 genomes];0.87[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv834522	chr2:212066442-212225328	Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:212114400-212117200	Weak transcription	Liver	Liver

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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