Variant report

rSNPs within LD-proxies of this variant (count:25)

rs_ID	r²[population]
rs10179582	0.81[AFR][1000 genomes];0.89[AMR][1000 genomes];0.87[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs10207680	0.80[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs1031212	0.83[CEU][hapmap]
rs10930038	0.80[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs1155072	0.80[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs11694747	0.86[EUR][1000 genomes]
rs12692644	0.80[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs12986816	0.80[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs13024803	0.85[AMR][1000 genomes];0.94[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs4283445	0.96[CEU][hapmap];0.80[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs4295034	0.96[CEU][hapmap];0.94[YRI][hapmap];0.87[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs4318407	0.87[EUR][1000 genomes]
rs4434022	0.96[CEU][hapmap];0.83[EUR][1000 genomes]
rs4435478	0.83[EUR][1000 genomes]
rs4461280	0.86[EUR][1000 genomes]
rs4464296	0.80[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs4597552	0.96[CEU][hapmap];0.82[EUR][1000 genomes]
rs4629182	0.85[AMR][1000 genomes];0.94[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs62167370	0.80[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs6432680	0.96[CEU][hapmap];0.80[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs6432700	0.80[CEU][hapmap]
rs7566441	0.82[EUR][1000 genomes]
rs7569176	0.96[CEU][hapmap];0.80[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs7581723	0.81[CEU][hapmap]
rs7586530	0.96[CEU][hapmap];0.83[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv995119	chr2:150556150-151294696	Enhancers Flanking Active TSS Weak transcription Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	18 gene(s)	inside rSNPs	diseases
2	nsv1001838	chr2:150819672-151745876	Enhancers Flanking Active TSS Weak transcription ZNF genes & repeats Active TSS Genic enhancers Strong transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	51 gene(s)	inside rSNPs	diseases
3	nsv535980	chr2:150819672-151745876	Enhancers Weak transcription Active TSS Strong transcription Transcr. at gene 5' and 3' Genic enhancers Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	51 gene(s)	inside rSNPs	diseases
4	nsv834412	chr2:151014270-151116638	Weak transcription Enhancers Flanking Active TSS Active TSS ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:11 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:151109400-151112600	Weak transcription	Aorta	Aorta
2	chr2:151111400-151113200	Enhancers	Ovary	ovary
3	chr2:151111600-151112800	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
4	chr2:151111600-151113200	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
5	chr2:151111600-151113200	Enhancers	NHDF-Ad	bronchial
6	chr2:151111600-151113600	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
7	chr2:151111600-151113600	Enhancers	Muscle Satellite Cultured Cells	--
8	chr2:151111600-151113800	Enhancers	NHLF	lung
9	chr2:151111800-151112800	Enhancers	Osteobl	bone
10	chr2:151111800-151113000	Enhancers	Liver	Liver
11	chr2:151111800-151116400	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung

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