Variant report

Variant rs1343471
Chromosome Location chr1:144927405-144927406
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:127 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:144922200-144929400 Weak transcription A549 lung
2 chr1:144922200-144930600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
3 chr1:144922200-144930600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
4 chr1:144922200-144930600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
5 chr1:144922400-144928000 Genic enhancers Skeletal Muscle Male skeletal muscle
6 chr1:144922600-144927800 Weak transcription ES-WA7 Cell Line embryonic stem cell
7 chr1:144922600-144929000 Enhancers HepG2 liver
8 chr1:144922600-144929600 Weak transcription H9 Cell Line embryonic stem cell
9 chr1:144923200-144929200 Weak transcription Primary neutrophils fromperipheralblood blood
10 chr1:144923800-144927600 Weak transcription Right Ventricle heart
11 chr1:144923800-144930400 Weak transcription Esophagus oesophagus
12 chr1:144923800-144930600 Weak transcription Spleen Spleen
13 chr1:144924000-144927800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
14 chr1:144924000-144929000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
15 chr1:144924200-144930400 Weak transcription Fetal Muscle Trunk muscle
16 chr1:144925000-144927600 Enhancers Breast Myoepithelial Primary Cells Breast
17 chr1:144925000-144927600 Enhancers Primary T helper naive cells fromperipheralblood blood
18 chr1:144925000-144927800 Transcr. at gene 5' and 3' Muscle Satellite Cultured Cells --
19 chr1:144925000-144927800 Genic enhancers Foreskin Melanocyte Primary Cells skin03 Skin
20 chr1:144925000-144927800 Enhancers Colon Smooth Muscle Colon
21 chr1:144925000-144928200 Transcr. at gene 5' and 3' NHLF lung
22 chr1:144925000-144930200 Flanking Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
23 chr1:144925000-144930600 Flanking Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
24 chr1:144925200-144927800 Transcr. at gene 5' and 3' Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
25 chr1:144925200-144929400 Enhancers Stomach Mucosa stomach
26 chr1:144925200-144932000 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
27 chr1:144925400-144928800 Weak transcription Thymus Thymus
28 chr1:144925400-144929000 Enhancers Fetal Heart heart
29 chr1:144925400-144930000 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
30 chr1:144925600-144929600 Weak transcription Placenta Placenta
31 chr1:144925800-144927800 Transcr. at gene 5' and 3' Osteobl bone
32 chr1:144925800-144928000 Flanking Active TSS Brain Anterior Caudate brain
33 chr1:144925800-144928000 Flanking Active TSS Brain Germinal Matrix brain
34 chr1:144925800-144928000 Flanking Active TSS Brain Inferior Temporal Lobe brain
35 chr1:144925800-144928000 Flanking Active TSS Fetal Brain Female brain
36 chr1:144925800-144931000 Flanking Active TSS Dnd41 blood
37 chr1:144925800-144931600 Flanking Active TSS Duodenum Mucosa Duodenum
38 chr1:144925800-144931800 Flanking Active TSS Primary T regulatory cells fromperipheralblood blood
39 chr1:144925800-144931800 Flanking Active TSS Adipose Nuclei Adipose
40 chr1:144926000-144928200 Flanking Active TSS Primary T helper naive cells from peripheral blood blood
41 chr1:144926000-144930200 Flanking Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
42 chr1:144926000-144930400 Flanking Active TSS Duodenum Smooth Muscle Duodenum
43 chr1:144926000-144930400 Flanking Active TSS Pancreatic Islets Pancreatic Islet
44 chr1:144926000-144930600 Enhancers Hela-S3 cervix
45 chr1:144926000-144931400 Flanking Active TSS Primary T helper memory cells from peripheral blood 2 blood
46 chr1:144926000-144931400 Flanking Active TSS Primary T helper cells PMA-I stimulated --
47 chr1:144926000-144931400 Flanking Active TSS Ganglion Eminence derived primary cultured neurospheres brain
48 chr1:144926000-144931600 Flanking Active TSS Primary T helper memory cells from peripheral blood 1 blood
49 chr1:144926000-144931600 Flanking Active TSS Liver Liver
50 chr1:144926200-144927600 Enhancers HUES64 Cell Line embryonic stem cell

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