Variant report

Variant rs1778104
Chromosome Location chr1:144911057-144911058
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:126 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:144852200-144913200 Weak transcription Stomach Mucosa stomach
2 chr1:144883000-144911600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
3 chr1:144888200-144914400 Weak transcription H9 Cell Line embryonic stem cell
4 chr1:144894000-144911600 Weak transcription Fetal Thymus thymus
5 chr1:144894800-144915400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
6 chr1:144898800-144923400 Strong transcription Adipose Nuclei Adipose
7 chr1:144900200-144921600 Weak transcription ES-WA7 Cell Line embryonic stem cell
8 chr1:144900600-144915000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
9 chr1:144900600-144919600 Strong transcription Liver Liver
10 chr1:144900800-144915400 Strong transcription Skeletal Muscle Female skeletal muscle
11 chr1:144900800-144919800 Strong transcription Rectal Mucosa Donor 31 rectum
12 chr1:144900800-144920000 Strong transcription Duodenum Mucosa Duodenum
13 chr1:144900800-144923600 Strong transcription Fetal Muscle Leg muscle
14 chr1:144901000-144921800 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
15 chr1:144901200-144920800 Strong transcription Rectal Mucosa Donor 29 rectum
16 chr1:144901200-144923800 Strong transcription Fetal Brain Female brain
17 chr1:144901200-144924200 Strong transcription Cortex derived primary cultured neurospheres brain
18 chr1:144901200-144925600 Strong transcription Placenta Placenta
19 chr1:144901400-144915400 Strong transcription Skeletal Muscle Male skeletal muscle
20 chr1:144901400-144923600 Strong transcription Brain Dorsolateral Prefrontal Cortex brain
21 chr1:144901600-144913400 Strong transcription HUES64 Cell Line embryonic stem cell
22 chr1:144901600-144924000 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
23 chr1:144901800-144923600 Strong transcription Brain Anterior Caudate brain
24 chr1:144901800-144925400 Strong transcription K562 blood
25 chr1:144902000-144923600 Strong transcription Duodenum Smooth Muscle Duodenum
26 chr1:144902200-144923600 Strong transcription Brain Cingulate Gyrus brain
27 chr1:144902200-144924200 Strong transcription Stomach Smooth Muscle stomach
28 chr1:144902400-144911600 Strong transcription HUES48 Cell Line embryonic stem cell
29 chr1:144902400-144914000 Strong transcription iPS-20b Cell Line embryonic stem cell
30 chr1:144902400-144918200 Strong transcription Left Ventricle heart
31 chr1:144902400-144924000 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
32 chr1:144902600-144913800 Strong transcription iPS-18 Cell Line embryonic stem cell
33 chr1:144902600-144918000 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
34 chr1:144902600-144919600 Strong transcription Fetal Intestine Large intestine
35 chr1:144902600-144924200 Strong transcription Fetal Muscle Trunk muscle
36 chr1:144902800-144913800 Strong transcription H1 Cell Line embryonic stem cell
37 chr1:144902800-144917800 Strong transcription Ovary ovary
38 chr1:144902800-144923600 Strong transcription Breast Myoepithelial Primary Cells Breast
39 chr1:144903400-144911400 Weak transcription Small Intestine intestine
40 chr1:144903400-144918200 Strong transcription Brain Inferior Temporal Lobe brain
41 chr1:144903800-144923600 Strong transcription Brain Hippocampus Middle brain
42 chr1:144905000-144921200 Strong transcription Fetal Kidney kidney
43 chr1:144905000-144923600 Strong transcription Brain Germinal Matrix brain
44 chr1:144906000-144915200 Weak transcription Primary neutrophils fromperipheralblood blood
45 chr1:144906800-144911200 Genic enhancers Primary T helper cells fromperipheralblood blood
46 chr1:144906800-144917400 Strong transcription Right Ventricle heart
47 chr1:144907000-144912600 Weak transcription iPS-15b Cell Line embryonic stem cell
48 chr1:144907200-144911600 Weak transcription Esophagus oesophagus
49 chr1:144907200-144914400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
50 chr1:144907600-144911200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell

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