Variant report

Variant	rs13435916
Chromosome Location	chr5:41193918-41193919
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 20 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs10058201	0.97[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs10069139	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs10070736	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs10155551	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs1035497	0.90[ASN][1000 genomes]
rs10473238	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs11749466	1.00[CHB][hapmap];0.86[JPT][hapmap];0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs11750411	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs13359770	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs16871019	1.00[CHB][hapmap];0.86[JPT][hapmap];0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs2305060	1.00[CHB][hapmap];0.86[JPT][hapmap];0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs403624	0.93[EUR][1000 genomes]
rs4245977	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs436077	0.90[EUR][1000 genomes]
rs4957379	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs55638961	0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs58096029	0.94[AMR][1000 genomes];0.93[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs6860770	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs7443594	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs9800055	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]

No data

Chromatin state (count:15 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:41184800-41195200	Weak transcription	Pancreas	Pancrea
2	chr5:41185200-41203200	Weak transcription	Fetal Intestine Small	intestine
3	chr5:41186600-41195000	Weak transcription	Fetal Intestine Large	intestine
4	chr5:41192800-41194000	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
5	chr5:41192800-41194000	Enhancers	Pancreatic Islets	Pancreatic Islet
6	chr5:41192800-41196000	Enhancers	Stomach Mucosa	stomach
7	chr5:41193000-41194600	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
8	chr5:41193000-41195200	Enhancers	Skeletal Muscle Male	skeletal muscle
9	chr5:41193200-41194200	Enhancers	Liver	Liver
10	chr5:41193200-41194400	Enhancers	Fetal Lung	lung
11	chr5:41193200-41194400	Enhancers	Rectal Mucosa Donor 31	rectum
12	chr5:41193200-41194600	Enhancers	Adipose Nuclei	Adipose
13	chr5:41193400-41194600	Enhancers	Muscle Satellite Cultured Cells	--
14	chr5:41193600-41194600	Enhancers	Fetal Heart	heart
15	chr5:41193800-41194200	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived

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